Danio rerio (zebrafish): 571851
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Entry
571851 CDS
T01004
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
571851 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
571851 (kdm2aa)
04121 Ubiquitin system [BR:
dre04121
]
571851 (kdm2aa)
03036 Chromosome and associated proteins [BR:
dre03036
]
571851 (kdm2aa)
Enzymes [BR:
dre01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
571851 (kdm2aa)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
571851 (kdm2aa)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
571851 (kdm2aa)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
571851 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
571851 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
LRR_4
PHD
C1_1
Cupin_8
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
571851
NCBI-ProteinID:
NP_001075161
ZFIN:
ZDB-GENE-061215-144
Ensembl:
ENSDARG00000059653
UniProt:
A0A0R4IH56
LinkDB
All DBs
Position
1:48098554..48129836
Genome browser
AA seq
1295 aa
AA seq
DB search
MDVMSAGDATSRSKRSGTRRRYQDDGISDDEIDGRRTFDLEEKLHSSFFSSDRVKRMEGK
DFSYEYVQRHGLRDPIIFEKPEGLGIKMPDPDFTVNDVKLFVGSRRIVDVMDVATQKGTE
MSMAQWRRYYETPPSQREKLYNVISLEFSHTKLETLVKRPSTVDMIDWVDNMWPRHLKER
QRDSTNSIMEMQYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHIHKGCKVFWLIPPTPQN
LELYENWVLSGKQGDIFLGDRATDCQRIELKQGYTFIIPSGWIHAVYTPVDTLVFGGNFL
HSFNVPMQLDISGIEDRTRVPVKFRYPFFFEMCWYVLERYLYSLTNKSHLIPEFQKHSLG
IGLKRENSEVLNGHAKEERDEMDAPSPPSAPGLKTHLTAFELEGLWRLVGKLESLPSNKK
CVPSGIHNAAALLLDIRALLKEHANDIPKLSYTGRPIVRWPKRPPWYQPPPPPPPVMRPK
LATTPIVPRPVKPASNMSVLRRRRVRCKRCEACLRTECGDCNFCRDMKKFGGPGKLKQTC
VLRQCLAPGLPLSAVCELCGEGNQETSEELMECSNCAQIAHPSCLKTSGEGVVNKDLPSC
WECPKCVLGKDTDSESSGSGDDITAQDGSGGRGGEGGAWHGVGRPPSSLSHGSLQKRAAA
PEQRLRKRIKLDGGKSHKRKSSSLDPRVAKIYRRHGMEHDDDSGSDDDGDGGRMSSVRSS
VSSSRRGYGASRRGVWRGSSQRGPRGGGSLSSSSLKMRRGLGARGERGGRVRLRGGSQMR
RRRYETDDDDDDDDDDDDDDDDDDDEDEDDEDDSEEDRHVSRSEKEHRSRRRRRRGDDYD
DDEDEDDDDEEDSEEQDYEGEDDEMEDLDDGGDEDDEDGENQSDSDPDPPVLLVSDLNDD
LLNDSYLTVTLHRPPKAKRDPGSIVPKLEAAMSPRTGGSSGFMQRKTLPKARPKTSSSTP
AGNGLSQAKSGRPTRRSSNQDGRERDTASPSSMSSRSSVSPPPPPPAVTSSSPSLLSHPS
FRDAGNELGCEKDIWVSVFRYLDRTDLAVCMRVCKAWFKWCCDKRLWTRIDLSRCRALSP
QAVTAIIKLQPVTLDLSWTPVSKKQLAWLIHHLPSLKDLIMSGCSSLCVSALSSPSCPSL
RTLDLCWAVGVKDSQIKDLIVQPGSESRSRLRSLVSLRLSGLELSDAVIKTMVRHMPSLR
QLDLSYCQGLTDQSINLLTATGCNTRNTLRQLNLSGCNKLSDGCLSYMKRLSALALLDLR
GCKNVTRHGCENFISDLSYCTVFCLTEDKLIQRVS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgtccgctggcgatgcgacgtcaagatctaagcggtctggcacgcggagg
cgttaccaagacgatggcatttccgacgacgagatcgatggaaggaggactttcgatctg
gaagagaagctacacagcagcttcttcagctcagaccgagtcaaacgcatggagggcaaa
gatttctcttatgagtacgtccagaggcatggtctccgggatcctatcatctttgagaaa
cccgaaggtcttggcatcaaaatgccagatccagacttcacagtaaatgatgtgaagttg
tttgtaggaagtcgacggatagttgacgtgatggacgtggctactcagaaagggacggag
atgtcgatggcccagtggaggcgctactacgagactcctccctctcagagagaaaagctt
tataatgtaatcagccttgagtttagccacactaaactagagacccttgtcaaaagaccc
tccacggtggacatgattgactgggtggacaacatgtggcctcgacacttaaaggaaaga
caaagagattctacaaactctatcatggagatgcaataccccaaagtgcaaaagtactgc
ctgatgagtgtgcagggctgttacacagatttccacatagactttggaggcacgtctgtg
tggtaccacatacataaaggctgcaaggtgttttggttaatccctcccacgcctcaaaac
ctggagctttatgagaactgggtgttgtcagggaaacaaggcgacatctttcttggtgac
agggccactgattgccagaggattgagctcaagcagggctacacgttcatcattccatca
ggctggatccatgctgtgtacacaccagtggacacgcttgtctttggtgggaattttctt
catagttttaacgtccccatgcaattggacatctccggcattgaagacaggacacgggtg
cctgtgaagttccgctatccgttcttctttgagatgtgctggtatgtgttggagcgttat
ctctacagcttgaccaacaaatcccacctcatcccggagttccagaaacactcactgggc
attggcttgaagcgggaaaactctgaggtgctgaatgggcatgcaaaagaggaaagagat
gagatggatgccccctctccccctagtgcaccagggttaaagactcacttgactgctttc
gagctggaaggcctgtggaggctggtagggaagctggaatcgctgccctcaaataagaag
tgtgtgccttcaggaatacacaatgctgctgccctgctgctggacatacgggcattgtta
aaagaacatgcaaatgacatccctaagctctcttacactggaagacccattgtcaggtgg
ccaaagaggcctccctggtaccagccccctcctccgcctccacctgtcatgcgtcccaag
ctggcgaccacacctattgtcccacggcctgtcaaaccagcctccaacatgtcggtcctg
cgccggcgccgcgtgcgttgcaaacgctgcgaggcctgtctgcgcacagaatgtggcgac
tgcaacttctgccgagacatgaagaaatttggcggccctggcaagctcaaacagacctgc
gtcctgcggcaatgtcttgctcctggtctgccgctctctgctgtgtgtgagctctgtggc
gaagggaatcaggagaccagtgaagagctgatggagtgttccaactgtgctcagattgca
catcccagctgtttgaagacgtctggtgagggagtggtgaacaaagacctgccgagctgc
tgggagtgtcccaagtgtgttttgggaaaagacaccgattctgagtcgtcaggcagcggt
gatgacatcacggcacaggatgggtcaggggggcgagggggcgagggcggggcgtggcat
ggggtcgggcggcccccctcttctctctctcacggctcgctccagaaacgggcagcagcc
cctgagcagcggctcaggaagaggattaaactggatggtggtaaatcacataagcgcaag
tcttcatctcttgatccccgcgtggctaaaatctaccggagacatgggatggagcacgac
gatgattcaggcagcgatgatgacggagacggtggcagaatgtcttcagtgcgcagcagc
gtttcctcatctcgcagaggttatggagctagcaggcgaggcgtttggagaggctcctca
cagcggggccctcgagggggcggaagcctgtcctcaagttccctcaaaatgaggagagga
ctcggagcaagaggagagagaggaggtcgggtgaggttgcgaggaggatcgcagatgagg
agacggcggtatgaaactgatgatgatgatgatgacgacgatgatgatgatgatgacgac
gacgatgatgatgacgaggatgaggatgatgaggatgacagcgaagaagacaggcatgtg
agccggtcagagaaggagcatcgttccaggagacgaagacgaagaggtgatgattacgat
gatgatgaggacgaggatgacgatgatgaggaggacagcgaagaacaggactatgaggga
gaggacgatgaaatggaggacttggatgatggaggagatgaagatgatgaggatggagaa
aaccaatcagactctgatcctgatccaccagttttgctcgtctcagacttgaacgatgac
ctgctgaacgattcctacctgaccgtgaccctccatcggccgccgaaggccaaacgtgac
cctggctcaattgtccctaaactagaggcggcgatgtccccccgcacgggtggcagttct
ggcttcatgcagcgaaaaactcttcccaaagcgcggcccaagaccagcagctccacccct
gctggaaacggcctctctcaggctaaaagcggccgtcccacgaggcgaagctccaaccaa
gatggcagagagagagacacggcgtcgccctcctccatgtcgtctcgctcctctgtttct
ccacctcctcctcctccagctgtcacctcttcctctccttcccttctctcacatccttca
ttccgtgatgcaggaaacgagctcggctgtgaaaaggacatttgggtgtctgtgtttcgt
tacctggatcggacagatttagctgtgtgcatgagagtctgcaaggcttggtttaaatgg
tgttgtgataaacgcttatggacacggatagatctgagtcgctgtcgggctctcagtcct
caggctgtgacggctatcattaaactacaacctgtgacccttgacctctcctggacacct
gtgtcaaagaaacagctggcctggctcattcatcacctcccaagtttaaaagatctaata
atgtccggttgttcttcattatgtgtgtctgcattaagctcgccgagctgtccgagtttg
cgaactcttgacctgtgttgggctgtgggcgtcaaagactcgcagataaaagatcttatt
gtgcagccaggcagtgaaagtcgcagtcgtctcagaagtttggtcagtctgcgcttgtct
ggtttggaattgagtgacgctgtcattaagacgatggtccgacacatgccttcactgcgc
cagttagatctgtcctactgtcagggcctcacagaccagtccatcaacctgctcactgct
actggatgcaacactcgcaacacactcagacagctcaatctttcaggttgtaataagctg
tcagatggctgtctctcatatatgaagcgattatccgctctggctctgttggatctgcgg
ggctgcaagaacgtgacccgacatggctgcgaaaacttcatctcggacctgtcctactgc
accgtattctgcctgaccgaggacaaactcattcagagagtatcctaa
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integrated database retrieval system
