Danio rerio (zebrafish): 572442
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Entry
572442 CDS
T01004
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
572442 (scn4aa)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
572442 (scn4aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
572442
NCBI-ProteinID:
NP_001034914
ZFIN:
ZDB-GENE-051201-2
Ensembl:
ENSDARG00000098738
UniProt:
Q2XVR3
LinkDB
All DBs
Position
12:5397673..5434904
Genome browser
AA seq
1829 aa
AA seq
DB search
MARLLPPTGTSVFRRFTPESLVEIERLIQEKSTREELEGAEEEPQAPSSDLEAGKCLPMI
YGDPPGDLLNTPLEDIDPFYKTQKTFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKI
LIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFT
FLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMIDVMILTIFALAVFALIGLQLFMGNLRQKCIRWPILNSTIFDVYNSNMVNDTTLNVT
DTFDFKAYINNEENQYFLEGSLDALLCGNSSDAGRCPEGYTCMKAGRNPNYGYTSYDNFG
WAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYDEQ
NEATLAEARDKEEEFQRLLEQLKNQETGSKASLASQKTQSRGSNRTGSLHDLADEDVIKD
CNGRIVPRLIVNRVSSNKELSAEEDQKSLSSKHSMQYLDQPKLSKRTASALSVLTATMEG
LEDAQRPCPPGWYKFADMFLKWDCCAPWILFKKWVHFVVMDPFVDLGITICIVLNTLFMA
MEHYPMSPHFEHVLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTLSLVE
LGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKDCVCKISEDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGAS
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRITRGIDWV
KALVASMVQRILGKKPDNTKEEGEGDIELYALNHLDEGKMADGLTNCLSPTLTVPIARCE
SDVEEDEDSESSDEEDAKATLNDGDSSVCSTVDYQPPEPEPEPEEVEEEEPEPEEPEACF
TEGCIRRCACLSVDITEGWGKKWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFEDIN
IERRRVIKTILEYADKVFTYIFIVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLTA
NLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIF
SIMGVNLFAGKFYHCINTTTEERIPMDVVNNKSDCMALMYTNEVRWVNVKVNYDNVGLGY
LSLLQIATFKGWMDIMYAAVDSREVDEQPSYEINLYMYLYFVIFIIFGSFFTLNLFIGVI
IDNFNQQKSKFGGKDIFMTEEQKKYYNAMKKLGAKKRPKPIPRPSNIIQGLVFDFISKQF
FDIFIMVLICLNMVTMMIETDDQSAEKEYVLYQINLVFIVVFTSECVLKLFALRQYFFTI
GWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFA
LMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFETFGGSIICLFEITT
SAGWDGLLLPILNSGPPDCDPDFENPGTDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYI
AIILENFNNAQEESGDPLCEDDFDMFDETWEKFDVDATQFIEYDRLFDFVDALQEPLRIA
KPNRLKLISMDIPIVNGDKIHSQDILLAVTREVLGDTIEMDAMKESIEAKFIMNNPTSAS
FEPIITTLRRKEEERAAIAVQRIYRRHLLKRAIRYACFMRRSKRKVRNPNDNEPPETEGL
IARKMNTLYGSNPELAMALELETRPMRPNSQPPKPSQVTQTRASVTFPRPQGQLILPVEL
TSEVILRSAPITHSLNSSENATTIKESIV
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcctgctccctcccacaggcaccagtgtgttccgccgcttcaccccagagtca
ctggtggagatcgagaggctcatccaggagaagagcaccagggaggaactagagggagcc
gaggaggaaccacaggcaccgagcagcgatctggaggcgggaaaatgcctgccgatgatc
tatggcgacccccccggggatctcctcaacacccctctggaagacatcgaccccttttat
aaaacacagaaaacttttattgtcataagcaagggaaacacaatcttcaggttctcttct
gaaccggcgatgttttgcatcagtccttttagtattgtcagaagaggagccatcaaaatt
cttatacattcattatttagcatgttcatcatgatcaccatcctgtccaattgcgtgttc
atgacgatgagtaaccctccagcctggagtaaaactgtcgagtatgtttttactggtata
tatacctttgaagcgactgtcaaagttttatcccgaggcttctgcattggaccttttaca
ttcctccgtgatccatggaactggcttgatttcatggtgatcagcatggcgtacgtcaca
gagtttgtagaccttggcaatgtgtcagcactgaggacatttcgtgtgcttcgagctctc
aaaacaatcacagttattcctggtttgaaaaccattgttggggctttgattcaatctgtc
aagaagatgatagacgtcatgattttgaccatctttgcactggctgtatttgccctcatt
ggactacagctgttcatgggaaatctgcgccaaaagtgcatccgttggcccattctcaac
agcaccatctttgacgtctacaactccaacatggtcaatgacaccaccctcaacgttacc
gatactttcgatttcaaagcttacataagcaatgaagaaaaccaatactttctggaagga
agtttagatgctttactatgtggcaacagttctgatgctgggagatgtccagaaggatac
acgtgtatgaaagctggtcgaaacccaaactatggctatacaagctatgacaactttgga
tgggcctttctcgccctcttcagactcatgacccaggacttttgggagaatcttttccag
ctgacccttcgtgctgctgggaagacttacatgatcttcttcgtggtggtcatcttcctg
ggctctttctacctcatcaatctgatcttggctgtggttgcaatggcatacgacgagcag
aatgaggccacattggccgaggctcgtgacaaagaagaggagtttcaaagattacttgag
cagctcaagaaccaagagacaggcagtaaagcatctttggccagccagaaaacacaaagt
cgagggtcaaaccggacaggttccctgcacgatcttgcagatgaagatgtcataaaggac
tgtaatggccgaatagtacctcgccttattgtcaacagagtttcctctaacaaagagtta
tcagcagaagaggaccagaagtctctgagttcaaaacacagcatgcagtacttggaccag
cccaaactctccaagagaacagctagtgctctcagtgtactcactgcaactatggagggg
ttggaggatgcccagaggccttgtccccctggctggtataagtttgcggatatgttcctt
aaatgggactgctgcgctccctggatcttgtttaagaagtgggttcattttgtagtgatg
gacccattcgttgacctgggtatcaccatctgcattgtgctcaatacactgttcatggcc
atggagcattaccctatgagtccacattttgaacatgtcctctcagtgggcaacttggtg
ttcacaggaatcttcacagctgaaatggtgttcaagcttatagctatggacccttactac
tacttccaggtgggctggaacatttttgacagcatcattgtcacactcagcctggtggag
ttgggactggccaacgttcagggattgtccgttctaaggtcctttcgtttgctacgtgtc
ttcaaactggctaaatcttggcccacccttaacatgctgatcaagatcatcggcaactca
gtgggtgctctagggaacctaacacttgttctggccatcattgtcttcatctttgccgtg
gtgggcatgcagctttttggaaaaagctacaaggactgcgtttgtaagatctctgaggat
tgcgagctgccccgctggcacatgaacgacttcttccactcattcctcatcgtctttcgg
atcttatgtggagagtggattgagactatgtgggactgcatggaggtggcaggagctagc
atgtgtttgatagtcttcatgatggtcatggtcatcggaaaccttgtggtgctgaatctg
tttctggccctgctgcttagctccttcagtggagataacctgtctggaggtgatgatgat
ggagagatgaacaaccttcagattgccattggccgcatcaccaggggtatcgattgggtt
aaagccttagttgccagtatggtgcaacggattctgggaaagaaacctgataataccaaa
gaggaaggggagggagacatagaactgtacgctttaaatcaccttgatgaaggaaaaatg
gcagatggtttgaccaactgtttgtctccaacattgactgtacctattgctcgttgtgag
tctgatgtggaggaagatgaggactctgaatcttctgatgaggaagacgcaaaggccact
cttaatgatggtgactcttcggtttgtagcacagtggactaccagcctccagaacctgag
cctgaacctgaagaggtagaagaagaggaaccagaacctgaagaaccagaggcctgtttc
acagagggctgtattaggcgatgtgcatgtttgagtgttgacatcacagaaggatggggt
aaaaaatggtggaacctcagaaggacatgcttcaccatcgttgagcatgattactttgag
accttcatcatctttatgatcctccttagcagtggagcactggcttttgaggatatcaac
attgagaggcgcagagtgatcaagaccattctggagtatgctgataaagtctttacatat
atttttatagtggagatgttactgaagtgggtggcatatggcttcaagacctacttcact
aatgcatggtgctggctggacttcctcattgtggatgtgtctctggtcagtttaacggct
aatttaatgggctactctgagctgggggcaatcaaatctctcaggacacttagagctctt
cgtccacttcgagccctatccagatttgaaggaatgagggtggtagtgaatgcacttgta
ggtgccattccctctatttttaacgtgctcctggtgtgtctgatattctggctcatcttc
agcattatgggggtcaatctgtttgccggaaaattctaccactgcatcaacaccaccaca
gaggaacggatccccatggatgtagtcaacaacaagagtgactgcatggcactgatgtac
accaacgaggtgcgatgggtcaatgtcaaggtcaactacgacaacgtgggactcggctac
ctctctctgctgcagattgccacattcaaaggctggatggatatcatgtatgctgcagtg
gattctagagaggtggatgagcagccatcatatgaaatcaacctttacatgtacctttat
tttgttattttcatcatttttggctccttttttactctcaacctctttattggtgtcatc
attgacaacttcaatcagcaaaaatcaaagtttggagggaaagacattttcatgactgag
gaacagaaaaagtattacaatgccatgaagaagctgggtgcaaagaaacgtccaaaacct
atacctcgaccatcaaatattatccagggtttggtgtttgacttcatatcaaaacagttc
tttgacatttttatcatggtgctaatctgcctcaacatggtgaccatgatgatagagacg
gatgaccagagtgctgagaaagaatatgtcctgtaccagatcaatctggtcttcatcgtc
gtcttcacaagtgaatgtgtacttaaattatttgcactcagacagtactttttcactatt
ggctggaacgtctttgattttgttgtagtcatcctttctattgcaggtctaatgttatca
gacatcattgagaagtactttgtgtctcctactttgtttcgtgtcatcagacttgcaaga
atcggccgtgtgctgcgtctcatcagaggggcgaagggcattcggacccttttgtttgcc
ttgatgatgtcacttcctgcccttttcaacattggactgcttctgttcctgatcatgttc
atcttctccatctttggcatgtctaactttgcctatgtgaaaaagcaggcaggcatcgat
gacatcttcaactttgaaacatttggtggcagcattatctgcctgtttgagatcacaacc
tcggcaggctgggacggccttctgctgcctattctaaacagtggccctcctgattgtgac
cctgactttgaaaaccctggtacagatgtgcggggaaactgcgggaatcctggcatgggc
atcatgtttttctgcagttacatcatcatgtcattcctggtggtcgtgaacatgtacatc
gccatcattctggagaacttcaacaatgctcaagaggaaagtggagacccgctctgtgag
gatgactttgatatgtttgatgaaacatgggaaaagtttgacgtcgatgctacgcagttt
attgaatacgaccgcttgtttgactttgtcgatgccctgcaggagcctttacgaattgcc
aaacccaaccgtctcaagctgatctccatggacatccccattgtaaacggcgacaaaatc
cactctcaggatatacttttagcagtgacccgggaagtacttggcgacactattgagatg
gatgccatgaaggagagcatcgaagccaagttcatcatgaacaaccccacatctgcctcg
tttgagccaatcatcaccactctcaggaggaaggaggaagagcgagcagccattgcggtt
caaagaatataccgtaggcatcttctcaagcgtgccatccgctatgcctgcttcatgcgc
caatcaaagaggaaagttaggaatcccaacgacaatgaacctcctgaaactgaagggttg
attgcaaggaagatgaataccctatatggcagcaatccagaacttgccatggctcttgaa
ttggagactaggccaatgcggccaaattcacagcctcctaaaccaagccaggtcacacag
accagagcatcagtgaccttccctaggccgcaaggacagctcatcctcccagtggagctc
accagtgaggtgatcctccggtctgcacccactacacacagcttcaacagttcagagaat
gcaacaacgataaaggagtcaatagtataa
DBGET
integrated database retrieval system
