Danio rerio (zebrafish): 58118
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Entry
58118 CDS
T01004
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform 1 precursor
KO
K04355
brain-derived neurotrophic factor
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
58118 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
dre04052
]
58118 (bdnf)
Cytokines and neuropeptides [BR:
dre04052
]
Cytokines
Growth factors (RTK binding)
58118 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
58118
NCBI-ProteinID:
NP_001295577
ZFIN:
ZDB-GENE-000412-1
Ensembl:
ENSDARG00000018817
UniProt:
A0A8M1P735
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Position
7:complement(31924983..31941670)
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AA seq
278 aa
AA seq
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MFQQVRRVMTILFVTMVISYFSCMRAAPMREIPGVQGGHRAEGYLGAAAAAAAAVTSGSR
GHGTPQSGGGLPSLTDTFEQVIEELLEVEGEATQQLGPGADQGQGGGGPIDAADSKDVDL
YASRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVT
AVDKKTAIDMSGQTVTVLEKVPVTNGQLKQYFYETKCNPLGYTKEGCRGIDKRHYNSQCR
TTQSYVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacaggttagaagagtgatgaccatcctgttcgttactatggttatttcatac
ttcagttgcatgagagctgcgcccatgagagagatcccgggcgtgcaggggggccaccgg
gccgagggctacctgggcgccgctgccgctgctgccgctgccgtcacatcgggcagccga
ggccacgggactccacagagtgggggcgggctgccctcgctcacggacactttcgagcag
gtcattgaggagttgcttgaggtggaaggggaagcgacgcagcaactggggcctggggcc
gaccagggccaaggagggggcggccctatagatgcggcagactcgaaggacgttgacctg
tatgcctcgcgggtgatgatcagcaaccaagtgcctttggagccgccgttactctttctc
ttggaggaatacaaaaactacctggatgccgccaacatgtcgatgcgtgtgcggcgacac
tcggaccccgcacggcggggggagctcagcgtttgtgacagtattagccagtgggtgaca
gctgtggacaaaaagacggcaatagacatgtcgggccagacggtcaccgttctggagaag
gtccccgtgactaatggtcagctgaagcaatacttttacgagaccaaatgcaaccccttg
gggtacacaaaggagggctgccgaggaatagacaagcggcactataactcgcaatgccgg
acaacccagtcttacgtgcgagcccttaccatggatagcaaaaggaagatcggctggcgg
tttatacggatagacacttcgtgtgtatgcacattgaccattaagaggggcagatag
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