Danio rerio (zebrafish): 767748
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Entry
767748 CDS
T01004
Symbol
abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre02010
ABC transporters
dre04146
Peroxisome
dre04977
Vitamin digestion and absorption
dre04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
767748 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
767748 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
767748 (abcd4)
04980 Cobalamin transport and metabolism
767748 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
767748 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
767748 (abcd4)
Enzymes [BR:
dre01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
767748 (abcd4)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
767748 (abcd4)
Transporters [BR:
dre02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
767748 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
AAA_7
AAA_22
FtsK_SpoIIIE
AAA_5
DUF87
NACHT
AAA_29
Motif
Other DBs
NCBI-GeneID:
767748
NCBI-ProteinID:
NP_001070185
ZFIN:
ZDB-GENE-050517-30
Ensembl:
ENSDARG00000061770
UniProt:
F1Q4Y1
LinkDB
All DBs
Position
24:39651258..39670724
Genome browser
AA seq
604 aa
AA seq
DB search
MTPMKQSSVKRPKLDWKFLQRFYSILKILFPSWSNQNVRMFMTLLGVTLSVQLVIYQVGL
IPSQFYRVLSERSYGKFKDLVVFAVVLILINSTLKSLDQYICSLLYVRWRKTLTEDLHHL
YFKGRVYYTLNILCKDIDNPDQRISQDVERLCKQMSTMASRLLITPFTVTYYTYQCFNSA
GWIGFVSIFSYFVVGTIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAS
NVEHMRTDRKLQMLLSTQRSLMNKELWLYLGVNTFDYMGSILSYIVIAIPIFAGNYDHLT
PGELSALISKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGELQEAMADIAKKQRDEY
QYDPVSKAESNSDRELQSVPADTAFVLDRLCYKSPLSEELLVKDLTLSISQGTHLLVVGN
TGTGKTSLLRVLNSLWEPCRGSVQMTTCFGPRGLMFLPQKAYLTDGTLRDQIIYPLKDIY
PSSGSIDDERILKYLELVGLSNLLTRIGGLDTEVTWNWYDVLSPGEMQRLCFARLLYLQP
KFAVLDEATSALTEEAEGQLYNACKQQGMTLISLGHRSTLEKHHDVMLRLCGGGQWELSK
LKEP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactcctatgaagcagagcagtgttaaaagaccaaagctagattggaagtttctccaa
agattttacagcattttaaaaatccttttcccatcctggtccaatcagaacgtccgaatg
ttcatgacccttcttggcgtcacactttcagtccagcttgtgatttatcaagtgggtcta
attccaagtcagttctacagggttctgtctgaaaggagttatggcaagtttaaggatctt
gtggtgtttgcagttgtactcatcctgattaattcaacgttgaagagtctggaccagtat
atctgcagtttgctgtatgtcagatggagaaagactttaactgaagatctccatcaccta
tacttcaagggacgcgtttactacaccctcaacatactgtgcaaagacatcgacaaccca
gaccagcgcatcagtcaggacgtggagaggttatgcaaacagatgagcactatggcgagt
cgacttctcataacgccattcactgtaacctactacacctatcagtgcttcaacagcgcg
ggctggattggatttgtcagcatcttcagttactttgtggtgggaaccatcatcaacaag
atcttaataggaccaattgtttccatgctggtggagcaggaaaagctggagggcgatttt
aggttcaaacacatgcaaattagagtgaacgcagagtctgcagctttttacagggcaagc
aatgtggaacacatgcggaccgaccgaaagctacagatgcttttgtcaactcagagaagc
ttgatgaacaaagagctctggctctaccttggggtaaacacctttgattacatgggcagt
atcctcagctatatagtcatcgcaatccccatctttgctggcaattatgaccacctgaca
cctggagaactgagtgcacttatcagcaagaacgctttcgtctgcatttatctgatcaac
tgcttcacccagctcatagatctctcaactacagtgtctgatgtcgccggatacacccac
agaattggtgaactgcaagaagcaatggcagatattgctaagaaacagcgtgatgagtat
cagtatgatccagtgtctaaggctgaatctaacagtgatcgggagctccagagtgttccg
gctgacacagcatttgtgcttgaccgcctctgctataaatctcccctctcagaggaactg
ctggtgaaagatctgaccctgagtattagtcaaggaacacacttactcgtggtgggaaac
acgggtacagggaaaacctcactactgagggtcttgaacagcctgtgggaaccatgcaga
ggttctgtgcagatgaccacatgttttggaccaaggggtttgatgtttttgccacagaaa
gcttatcttactgatggcacacttagagatcagattatctacccgttaaaggacatatat
ccttcctcaggttctatagatgatgaacgaatattaaagtacctggaacttgttggtttg
tcgaatcttctgaccagaattggaggactggatacagaagttacttggaactggtatgac
gttttatccccaggagaaatgcagaggctttgctttgctagactgttatacctgcagccc
aaatttgcagttctggacgaggccactagcgctctgacagaggaagctgaaggccagctc
tacaatgcctgtaagcagcagggaatgaccctaatcagtctgggccaccgaagcactctg
gaaaagcaccatgatgtcatgctgcgactgtgtggaggtggccaatgggagctcagcaaa
ctcaaagagccatga
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