Danio rerio (zebrafish): 793673
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Entry
793673 CDS
T01004
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04217
Necroptosis
dre04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
793673
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
793673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
793673
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
793673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
793673
NCBI-ProteinID:
XP_001333481
ZFIN:
ZDB-GENE-101223-1
Ensembl:
ENSDARG00000076995
UniProt:
X1WDE8
LinkDB
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Position
2:complement(484473..494756)
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AA seq
394 aa
AA seq
DB search
MSTSTGCSTVLMSVRVSVRPLPVGSDSLRLQLSMNPNRAGLFTLTLRHTDRGGRSVSLAE
FDLRSVQYELKSPRCHELRLLKPPHDCLSFSFRSEQEAQEWATVVMSSLRESHRVASICQ
EGLQYVKSGEKSAVLSLSMKEELCVELSRAIEAGDAQAAARYATDLAQQQMTLSIQPAPR
DTDDKDISLAVIVEDASSSCCVTVKIHPHVTVASLKQQMFVEYGFHPRVQRWIISQCLCS
DSRSVSSYGVCRDGDTAFLYLLSAGHASLSQQQENGLSVPTAAPANASLSAPAGGGSSGH
DWRAYSTLPPRFSHASTGSGGSEKPSVTDIINLEMLQLGGSKLKSSNTQSGWPCPSCTFI
NKSTRPGCEICSTDRPNPPHHTHLQQEKSRRSNQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagcacgggctgcagtacggtgctgatgtcggtgcgggtctccgtgcggccg
ctgccggtgggctccgactctctgcggctgcagctcagcatgaacccgaaccgcgcgggg
ctcttcaccctcacactgagacacaccgaccgcgggggacgtagcgtgtctctggcagag
ttcgacctgcgctcggtgcagtatgagctgaagtctccgcgctgtcatgagctgcgtctc
ctcaagccgccgcacgactgtctgagcttcagcttccgcagcgagcaggaggcgcaggag
tgggcgaccgtcgtcatgtcctcactgcgggagtcacacagagttgccagtatttgtcag
gaaggcctgcagtatgtgaagagtggagagaaaagcgcagtcctgtctctgtcaatgaaa
gaggagctgtgtgtggagctttccagagcgatagaggctggagatgctcaggccgctgcg
cgttacgccacagatctggcccagcagcagatgacgctcagcattcaaccagcgccgcgc
gacaccgacgacaaagacatcagcttggctgtgatagtggaagatgcgtcgtcttcctgc
tgtgtgacggtgaaaatccacccgcacgtgaccgtcgcctcgctaaagcagcagatgttt
gtggagtacggttttcacccgcgggtgcagcgctggatcatctctcagtgtttgtgctct
gacagtcgctcggtgtcgtcctatggcgtctgcagggatggagacactgcgttcctctac
ctgttatccgcaggtcacgccagcctcagccagcagcaggagaacgggctctccgtgccc
acagcggctccagcaaacgcttcactttcagccccggcgggcggcggcagcagcgggcac
gactggagggcgtacagcactctaccaccacgcttcagccacgccagcacaggcagcggc
ggctcagaaaagcccagcgtcactgacatcattaacctggagatgctgcaactcggaggc
tccaaactcaagtccagtaacacacagtcaggctggccctgcccgtcctgtacgttcata
aataaatctacgagacccggctgtgaaatctgcagcactgaccggcccaatcctccacat
cacactcatcttcaacaggagaagtcaagaagatccaaccagtga
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