Danio rerio (zebrafish): 796490
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Entry
796490 CDS
T01004
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04510
Focal adhesion
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
796490 (pdgfbb)
04020 Calcium signaling pathway
796490 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
796490 (pdgfbb)
04540 Gap junction
796490 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
796490 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
dre04052
]
796490 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
796490 (pdgfbb)
Cytokines and neuropeptides [BR:
dre04052
]
Cytokines
Growth factors (RTK binding)
796490 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Growth factors/receptors
796490 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
796490
NCBI-ProteinID:
XP_021329258
ZFIN:
ZDB-GENE-131121-332
Ensembl:
ENSDARG00000038139
UniProt:
A0A2R8Q0D8
LinkDB
All DBs
Position
3:23017351..23037503
Genome browser
AA seq
483 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKAGSVSSIQDLQFLLFSESIEVEPD
SHHDNDSSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNADFLLWPPCVEVQRCS
GCCNTKTLQCVPVLTHTRYLQVMKIQYVKKRPLYDKAVVSVLDHVECRCQPAPRPAHRRK
SSSQKLDARDRSEKSRPKEDLHRRDELKHNQRLNLEDLLSHSWLPQDRFSESPDTVHFGR
DAWTRNETQYGGGKSHHRHPVDVRKHSTTNDTSTQGTMAPIPNHTEQEETDTSLRNITQI
ESQNYTNRNITNQTSEFNNGVSETTNQTFKHQSNLTQLNEQLRTMNRTYSNATETANLNR
GDVFVSVEESVKKLRGETTDVEKVKVDEAEDLLLLHKLMDEEKHKPHLKVQQTNVQPDKK
LQQLHHKQQQHTYTTTQRTAGTTSPPLHHQPPHKPPRPPPQPPKKRRKQRNRISKSAMRA
LLM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgcggattccgcttcttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggctgatcctctgccggccgctgtggttgagttggtgaaggctggatctgtg
tcttcaattcaagacctgcagtttctgctcttctctgaatccatagaggtcgagcctgac
agccatcatgacaatgactccagcaaccgtctgccgcgcagtcttctagacgctcagcct
gctcagcaagccatctgtaaggtcaggactgaggtcatagaggtcacgcgctccatgttg
gaccgtagcaatgcagatttcctgttgtggcctccgtgcgtggaggtgcagcgttgctca
ggctgttgtaacaccaagaccctgcagtgtgttcctgtactcacacacacaagataccta
caggtgatgaagatacagtacgtgaaaaagcgtccgctctatgataaggcagtggtctct
gtcctggatcatgtagagtgtcgttgtcaacctgctcctcgccccgcacatcgccgaaag
tcatccagccagaaactagacgcacgtgatcgttcagagaaaagtcgacccaaagaggat
ctccatcgcagggatgaactcaaacacaaccagaggctaaacctggaggacctgctcagc
cacagctggctgccccaagacaggttctctgaatcaccagacactgtccattttggccgc
gatgcctggactcgaaatgaaacgcaatatggagggggtaaaagccatcatcgtcaccct
gtggatgtaagaaaacacagtaccacgaatgacacatcaacacagggaacgatggctcct
attcccaatcatactgagcaagaagaaactgatacttcattgcgcaacattacgcagatt
gaatcacaaaattacactaaccgcaatataacaaatcagacttctgaatttaacaatggt
gtgtcagaaaccaccaatcagacttttaagcaccagtcaaacctaacgcaactaaatgaa
cagttgcgaacgatgaatcggacatactccaacgccacagaaacagccaatctgaatcga
ggagatgtgtttgtgtctgttgaggagagtgttaagaagttaagaggtgagactacagat
gtggagaaggtcaaggtggacgaggcggaagaccttctgcttctgcacaaactcatggat
gaagagaaacacaaacctcacctcaaagtgcaacagaccaatgtacagccagataagaaa
ctgcagcagctccatcacaaacaacaacaacacacctatacaaccacacaacggacagca
ggaacaacatctcctcctctgcatcatcaacctccacacaaaccacccagaccacctcct
caacccccgaaaaagaggagaaaacagcgcaatcgcatcagcaaatctgccatgagagct
ctgctaatgtaa
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