Danio rerio (zebrafish): 797838
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Entry
797838 CDS
T01004
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
797838 (pkp1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
797838 (pkp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
797838
NCBI-ProteinID:
XP_001338299
ZFIN:
ZDB-GENE-030131-417
Ensembl:
ENSDARG00000052705
UniProt:
E7FBR0
LinkDB
All DBs
Position
6:54711191..54754044
Genome browser
AA seq
736 aa
AA seq
DB search
MMPEPLKSALSLGNMEDTSLAVPSDIEHRSAQQRVLEQVHTIKKSKSKYRSKSKSVSALA
TSPTSPEGDSVFYDFKFSPGTSLSGPSFNRGGNMTNGAMQRQNILRKSTNSRSSSGQQVN
SNSGRFDRSIYGFQGSVSTQQKTSNQLYNKSTRSAPDLGFQPTTNGMSSTGQRSQTSRQT
FQRWEKGSQMPSSSYSNGTTLVRMSNSNQVNAVSRRPSSLQSNGESRMSMIRSGQAKDFS
GMTLEKPVSDMTMRDAVDCLSSTDENVQLCGASYIQHSTFNDDKAKQEVLTLKGLPLLVD
LLGSSSPQVQETVAAALRNAIFKNLPNKQEVQRSGGIKQAAQLLGDANTETQKHLTGLLW
NLSSEDGLKPDLLRTALPALTEKVIEPFSANTVDNANTSLAPEVFCNATACLRNLSGSKL
ANRQSMRNCKGLIDSLMRYTENCITAGMPDNQSLENCVCILHNLTYQLETEMPTLFNKIN
ALASQSHNRSSSSDAGPIICFRLQSQKLKQRGFDYPVMEDNNPEGVGWLFHSKALQFYLN
LLSSSERDATLEACCGTLQNLTANEGIVSNFLSQTIVQKLNGMKFITPLLQSTNPALQNS
AVALLGNLSKSSQTNKVMAPQSLPQLVGFLNSGLSKKESSPEYDSAMATALRSANTLINA
DPDTGKNLLNNSLINNLYNMSLNRDLQKSSKASALLLHNLWSNKNIQSFLKKNGMKKKSF
VNEVTSAAFKSHLVID
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggccctgtctctggggaatatggaggacacgtccctg
gcggtgccgtccgacatcgagcatagatccgcgcagcagcgggtgctggagcaggtgcac
accatcaagaagagcaagtccaaatacaggagcaagagcaagagtgtgtccgcactcgcc
acctcgcccactagtccagaaggggacagtgtgttttacgacttcaagttctctcctggc
acatctctcagtggaccctcgttcaacagaggaggaaacatgacaaatggggccatgcaa
agacaaaacatcttgcgcaagtccaccaactcccgcagctccagtggacagcaagtaaac
agcaactccggcagattcgatcgctccatctacggatttcaaggctctgtctccacccag
cagaagaccagtaaccagctctacaacaaatccacccgcagcgctccagacctgggcttc
caacccaccaccaacggcatgagcagcacgggtcaacgcagccaaaccagccggcagacc
ttccagaggtgggagaaaggcagtcagatgccctcctccagttacagtaacggcaccacc
cttgtccgaatgtcaaacagcaatcaggttaacgccgtcagcagacgcccatcctccctg
cagtccaatggagagtccagaatgtccatgatcaggtctggacaggccaaagatttttct
gggatgaccctagagaagccggtgtctgatatgaccatgcgggatgctgttgattgtctg
tccagtacagatgaaaacgttcagctgtgtggagcgtcttacatccagcacagtacattc
aatgatgacaaggccaagcaggaggttttgactctgaaaggtctgccgctgctggttgac
ctgctgggcagctccagtcctcaggttcaggagacggtggctgcggcgctgcgaaacgcc
atcttcaaaaacctgcccaacaaacaggaggtgcagcgaagtggaggaatcaaacaggcc
gcacaactgctgggcgacgctaacactgagacacagaaacacctgacaggtctcctgtgg
aacctttcatctgaagatggtctgaagccggatctgctccgtacggctctgcctgctctc
acagagaaagttatagagccgttttcagccaatacagtcgacaacgccaacacaagcctg
gcaccagaggttttctgcaatgccacggcttgcctacgcaacctgagcggatccaaactg
gcgaaccgacagtccatgcgcaactgcaaaggcctgatcgactcgctcatgcgatacaca
gagaactgcatcaccgcaggaatgcctgataaccagtcgttggagaactgcgtttgcatt
ttgcacaacctgacctatcagctggagaccgagatgccgactctcttcaacaaaataaac
gctctggccagtcagtctcacaaccgctccagttcctctgacgctggtcctatcatctgc
ttcaggttacagagccagaaactcaagcagaggggttttgactatcctgtgatggaggat
aacaaccctgaaggtgtgggctggctcttccactctaaagcgctgcagttttacctcaat
ctgctgagttccagtgaacgggacgccacactggaggcctgttgtggaaccctgcagaac
ctcacagccaatgaaggcatagtatcgaattttttgagtcaaacaatcgttcagaagctc
aacggcatgaagttcatcactcctctactgcagtcgaccaatcctgctctacagaacagc
gcagtcgctctgctggggaatctgtccaaatcctcacaaacaaacaaagtaatggcacct
cagtctctgccgcagctggtgggtttcctgaactctggtctttccaagaaagaatcttct
cctgaatatgacagtgcgatggccaccgctctgcgcagcgcaaacactctgattaatgcg
gatcctgatactggcaagaacctgctgaacaacagcctgatcaacaacctctacaacatg
agtctcaatagggatcttcaaaagtccagcaaagcgtcagcacttcttcttcacaatctg
tggtcgaataagaatatccaaagctttcttaaaaagaacggcatgaaaaagaagtccttt
gtgaatgaagtgacgtcagcagctttcaaatctcatctggttattgactga
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