Desulfovibrio subterraneus: LN040_08890
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Entry
LN040_08890 CDS
T08953
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb01501
beta-Lactam resistance
dsb01503
Cationic antimicrobial peptide (CAMP) resistance
dsb02020
Two-component system
dsb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LN040_08890
09132 Signal transduction
02020 Two-component system
LN040_08890
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN040_08890
01503 Cationic antimicrobial peptide (CAMP) resistance
LN040_08890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_08890
02044 Secretion system [BR:
dsb02044
]
LN040_08890
01504 Antimicrobial resistance genes [BR:
dsb01504
]
LN040_08890
Transporters [BR:
dsb02000
]
Other transporters
Pores ion channels [TC:
1
]
LN040_08890
Secretion system [BR:
dsb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LN040_08890
RTX toxin transporter
LN040_08890
Multiple protein transporter
LN040_08890
RaxAB-RaxC type I secretion system protein
LN040_08890
Antimicrobial resistance genes [BR:
dsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LN040_08890
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LN040_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WBF69187
LinkDB
All DBs
Position
complement(1947632..1948960)
Genome browser
AA seq
442 aa
AA seq
DB search
MRIRKQSVLLSFLLVSLLAFSAHAEEMTFDLEATVNKALKDNPSIEASRASALGAEEGRK
AARGAFGPKLTASYGYTYKDHKKNYRDAPIYDDDYYSLGANVSQPLFTGFNILSTYQKAE
LSKESAELAKDQTELSLILNVQENFINLLIARENVRSAQATLERLASQLKVTQAYYDVGL
QPRIDVLRAEVQLSDAENSLLQAENAREIQRTRLNTLLNLPLDADVKYMGELVYTPIPMD
LEASLNFAAKERPDLLIARKAIDIAMKDLKITESDFYPQLAASFDWSRMGDHPQVDGSDF
ARTEFSEWEAKATMSWELFSWGTTYYAAQRDKQTIAKLKAEEASTWQEALYEIKSRHLSI
AEAAKRIKVAQKTVDSAQEAYRMALARYQAQVGTNNDVLDAQADLSSAEASYTKAQGDYM
IAIARLYNAIGEKNPGLSTTGN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcgcaaacagtccgttctgctctcttttctgctcgtcagtctgctggctttt
tccgcccatgctgaggaaatgacgtttgaccttgaagctactgtaaataaggccctcaag
gacaaccccagcattgaggcatcccgcgcatccgctcttggagccgaggaaggtcgcaag
gccgcccgtggcgcgttcggtcccaagctgaccgcctcgtacgggtatacctacaaagac
cataagaagaattatcgtgatgctcctatctacgatgatgattactactctcttggcgca
aatgtaagccagcccctctttactggcttcaacatcctgtccacctaccagaaggctgaa
ctgtccaaggaaagtgcagagcttgccaaggaccagaccgagctttcgcttattctcaat
gtacaggaaaatttcatcaacctgctcatcgcccgcgagaacgtgcgtagcgcgcaggcc
actcttgaacgtcttgcttcgcagctcaaggtgacgcaggcatactacgacgtgggtctg
cagccccgcattgacgtgctccgcgctgaagtgcagctttccgatgctgaaaattccctg
ctgcaggcagagaacgcccgcgaaattcagcgcacccgcctgaacacgctgctcaacctg
ccgctggatgccgacgtgaagtacatgggtgaacttgtctacacgccgatacccatggat
ctggaagcaagcctgaattttgccgccaaggaacgccccgacctgctcatcgcccgcaag
gccatcgacattgccatgaaggacctgaagatcaccgaaagtgacttctatccccagctg
gctgcctcgttcgactggtccagaatgggcgatcatccgcaggtggacggcagcgacttt
gcccgtaccgaattcagcgaatgggaagccaaggccaccatgtcgtgggaactgttctcc
tggggtaccacctactatgccgcacagcgtgacaagcagaccattgccaagctgaaggcc
gaagaagccagcacctggcaggaagccctgtacgaaatcaagtcccgtcacctgagcatt
gcagaagctgcaaagcgtatcaaggtggcccagaagactgttgattccgcacaggaagca
taccgtatggcccttgcacgttatcaggcacaggttggcaccaacaacgacgtgcttgat
gcgcaggctgacctttcctctgccgaagcttcctacaccaaggcacagggcgactacatg
atcgccattgcccgtctgtataacgccatcggcgaaaagaatcccggcctcagcaccaca
ggcaactag
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