Dinoroseobacter shibae: Dshi_0178
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Entry
Dshi_0178 CDS
T00612
Name
(GenBank) aminotransferase class I and II
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00270
Cysteine and methionine metabolism
dsh00450
Selenocompound metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01230
Biosynthesis of amino acids
Module
dsh_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Dshi_0178
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Dshi_0178
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsh01007
]
Dshi_0178
Enzymes [BR:
dsh01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Dshi_0178
Amino acid related enzymes [BR:
dsh01007
]
Aminotransferase (transaminase)
Class II
Dshi_0178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Aminotran_3
NIR_SIR_ferr
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABV91927
RoseoBase:
Dshi_0178
UniProt:
A8LLB7
LinkDB
All DBs
Position
complement(181801..182973)
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AA seq
390 aa
AA seq
DB search
MTFDTEIDRRNTDCIKWDKMESAFGVSPEDGLAMWIADMDFPPGPFLQEAMQGLLARADY
GYFCGLESYEDAIIGWMRDRHGWTVEREWMFTTYGLGNGIAITLNALTAPGDEVIIFSPV
YHEFAAKITKTGRVVKELPLAIVDGVYTMDFDAYAGMLSGRETMVIACSPHNPAGRVWTQ
EELTALADFCQRHDLLLISDEIHADLTFAGHTHIPMHVAAPQIADRLVMTTSASKTFNIA
GGRTGCVTIPDPDLRARFHRFFNTLDMQPNLLGVALTRAAYSPAGAAWCDALCTYLEGNA
AVFNDGVNAIPGLSAMPMQGTYLAWVDFAGTGMERPEFSERVYGTARIAATPGHTLGKGG
ESCLRFNVGMPRARVQEAVDRLADAFADLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgacaccgagatcgaccggcgcaacactgactgcatcaaatgggacaaaatg
gagagcgccttcggcgtctcgcccgaggacgggctggccatgtggatcgcggacatggat
ttcccgccaggcccgtttctgcaggaggccatgcagggcctgctcgcccgcgccgattac
ggctatttctgcgggctggaaagctatgaggacgcgatcatcggctggatgcgcgaccgc
catggctggaccgtggagcgggagtggatgttcaccacctacgggctcggcaacggcatc
gccatcacgctgaacgccctgaccgcgccgggcgacgaggtgatcatcttctcgcccgtc
taccacgagtttgccgccaagatcaccaagaccggccgggtggtgaaggagttgcccctg
gcgatcgtggacggggtctacaccatggatttcgacgcctatgcggggatgctgtcgggg
cgcgagaccatggtcatcgcctgctcgccccacaaccccgcgggccgtgtctggacacaa
gaggagctgaccgcgctcgccgatttctgccagcgtcacgacttgctgctgatctccgac
gagatccacgcggacctgaccttcgcaggccacacccatatcccgatgcacgtcgccgcg
ccccagatcgccgaccggctggtgatgaccacctcggcctccaagaccttcaacatcgcg
ggcgggcgcacgggctgcgtcaccattcccgaccccgacctgcgcgcgcggtttcaccgg
ttcttcaacacgctcgacatgcagcccaacctgctgggcgtggccctcacgcgagcggcc
tactccccggcgggcgcggcctggtgcgacgcgctctgcacctacctggagggcaacgcc
gcggtcttcaatgacggcgtgaacgccatccccggcctctcggccatgccgatgcaaggc
acctatctggcctgggtggatttcgcgggcaccggcatggaacggccggaattttccgag
cgtgtctatggcacagcccgcatcgcggccacgcccggccatacactgggcaagggcggc
gagagctgcctgcggttcaatgtcggcatgccgcgcgcacgggttcaggaagccgtggac
cggctggccgacgctttcgcggacctgcagtga
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