Dinoroseobacter shibae: Dshi_0916
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Entry
Dshi_0916 CDS
T00612
Name
(GenBank) efflux transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh01501
beta-Lactam resistance
dsh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dshi_0916
01503 Cationic antimicrobial peptide (CAMP) resistance
Dshi_0916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsh03036
]
Dshi_0916
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0916
01504 Antimicrobial resistance genes [BR:
dsh01504
]
Dshi_0916
Chromosome and associated proteins [BR:
dsh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Dshi_0916
Transporters [BR:
dsh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dshi_0916
Antimicrobial resistance genes [BR:
dsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Dshi_0916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ABV92661
RoseoBase:
Dshi_0916
UniProt:
A8LRV4
LinkDB
All DBs
Position
937856..939046
Genome browser
AA seq
396 aa
AA seq
DB search
MTLCSLLRPLYFMLALMVLPTVPPLFAQERPAAVVTETVEERALAETLPVFGQVVASRDS
AVASRTAGIVDEVAVLVGDRVAEGATLAVLDTELAQIELEQALADIAEARAGIAVAEAQL
GRAEDARDRVEGLRNTASFSSARFDDAMSDLAAATGELNQARARLLNAEAAEQRARYTLD
RARITAPFAGVVLSVAADPGQFISVGDPIARIIDINALEIEAQVPSQFAPAIPPGVTVKG
VSEAGQQLDLQIRAILPTESVSTRTRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAAL
AVPKDALVQGAQGWTVFVDADGIAEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLR
PGQALQAVDGAPGGGAPEEGARTPDDTQSRAAPQSN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgtgttccttgctccgccctctgtatttcatgctcgccctcatggttctgccg
accgttccgcctctgtttgcgcaggagcgtcctgccgccgtggtgaccgagaccgtcgag
gagcgcgcgcttgccgagacgttgccggtcttcgggcaggtcgtggcctcgcgcgacagt
gctgtggcgtcccggacggccgggatcgtggacgaggtcgcggtgctggtgggcgaccgg
gtggccgagggggcgacccttgcggtgctcgataccgagctggcgcagatcgagctggag
caagcgctggccgacatcgccgaggcccgggccgggatcgccgtggccgaagcacagctc
ggccgcgccgaggatgcccgtgaccgcgtggaagggttgcgcaacaccgcatcgttcagc
tcggcgcggtttgacgacgccatgagcgatctggcggcggccacgggagagctgaaccag
gcccgcgcgcggcttctcaatgccgaggccgccgagcaacgggcgcgctacaccctggac
cgcgcgcggatcacggcccctttcgcgggggtggtcctgtcggtggcggccgatcccggg
cagtttatctcggtcggagatccgatcgcgcgcatcattgatatcaatgcgttggagatc
gaagctcaagttccgtctcaattcgcgcccgccattcccccgggggtgaccgtcaaggga
gtgagcgaggcggggcaacagctcgacctgcagatccgcgcgatcctgccgaccgagagc
gtctcgacccggacacggcccgtgcggttgtcgggggaccttgacgcgctgggtgcgacc
ctggccgtgggtcagtcgatcacgctgcaagtgcccgtgagcgcgccgcgcgcagccctt
gccgtgccgaaggatgcgctggtgcagggcgcgcagggctggaccgtcttcgtcgatgcc
gatgggatcgccgagccgcgcccggtgcgcatcggggtggccatgggtgaccggttcgag
gtgctgagcggtcttgcggagggcgatgccgtggtcgttcggggcaatgagcgcctgcgc
ccgggccaggccctgcaggcggtggacggtgcgccaggcggaggagcgcccgaagagggc
gcgaggacgcccgacgacacccagtcgcgcgccgcgccgcagagcaattga
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