Dinoroseobacter shibae: Dshi_3268
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Entry
Dshi_3268 CDS
T00612
Name
(GenBank) putative coenzyme F420 hydrogenase
KO
K00441
coenzyme F420 hydrogenase subunit beta [EC:
1.12.98.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00680
Methane metabolism
dsh01100
Metabolic pathways
dsh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Dshi_3268
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.98 With other, known, physiological acceptors
1.12.98.1 coenzyme F420 hydrogenase
Dshi_3268
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GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
DUF7712
Motif
Other DBs
NCBI-ProteinID:
ABV95001
RoseoBase:
Dshi_3268
UniProt:
A8LMS6
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All DBs
Position
3432733..3433962
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AA seq
409 aa
AA seq
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MLDQTPPALWAPTPGPAAQRKLCTDCGLSRTKDAAKCGQACQFIQPDYPKMEAQVHGRAR
DPGRGDEQFFGPYRRMYRAALHAPKPGAQWTGLTTRLAQKLLEDGAVDAVLGMGPDPEDS
WRPRPVIITDPAEMAHLRGMRMGYAPLLSLLEPAAKTGLRRLAIIGIPCQVYALRAMEAE
LGFERLYVIGTPCSDNTTTENFHQFLARLSPRPEDITYLEFRADYHVELRFIDGSRRDIP
FLKLPLSDLPNDFFPMTCRTCVDYTNTLADITVGYMAGEGDQWLIVRNARGQEILDRLGD
EVRLETPGSAGKRAGSVKGFAENTARAAGGLPLRKMPDWARGIVGWLMPRIGPKGLEFAR
ARVEMKAVETVLHLRRAHPKRMRAMIPDHVWRLAEPYGLTPKPGERSED
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccagaccccgcctgccctctgggcgccgacacccggccccgcggcccagcgc
aagctgtgcaccgattgcgggctgtcacggaccaaggatgccgcgaaatgcggacaggct
tgccagttcatccagccggactatccgaagatggaagcgcaggtgcatggccgggcgcgg
gatcccggccggggcgacgagcaattcttcggcccctaccggcggatgtaccgcgccgcc
ctgcacgcccccaaacccggcgcgcaatggacggggctgaccacgcggcttgcgcaaaaa
ctgctggaggacggggcggtggacgcggtgctcggcatggggcccgaccccgaggacagc
tggcgtccgcgcccggtcatcatcaccgaccccgcggagatggcccatctgcgcgggatg
cggatggggtacgcgccattgctgtcgctgctggagccggcggcgaaaacgggtctgcgg
cgcctggcgatcatcggcatcccctgccaggtctatgccctgcgcgcgatggaggcggag
ctggggttcgagcggctctatgtcatcggcacgccctgttcggacaacaccacgaccgag
aacttccaccagtttctcgcccgcctctcgccgcggcccgaggacatcacctatctcgag
tttcgcgccgattaccatgtcgagttgcgcttcatcgatggcagccgccgggacatcccg
tttctgaaactgcccctgtcggacctgcccaacgatttcttcccgatgacctgccggacc
tgtgtcgactacaccaatacgctggccgatatcacggtgggctacatggcgggcgagggt
gaccagtggctgatcgtgcgcaacgcgcgggggcaggagatcctcgaccggctgggcgac
gaggtgcgcctggaaacgcccggatcggcaggcaagcgggccgggtcggtcaaggggttt
gccgagaacacggcgcgggccgctggcgggctgcccctgcgcaagatgcctgactgggcg
cgggggatcgtcggctggctgatgcccaggatcggacccaaggggttggaattcgcgcgg
gcccgggtcgagatgaaggcggtggagacggttctgcacctccgccgggcgcacccgaaa
cggatgcgcgcgatgatcccggaccatgtctggcggctggcagaaccctatgggctgaca
ccgaagccgggcgagcggtcggaggattag
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