Dinoroseobacter shibae: Dshi_4135
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Entry
Dshi_4135 CDS
T00612
Name
(GenBank) coenzyme F420 hydrogenase/dehydrogenase, beta subunit
KO
K00441
coenzyme F420 hydrogenase subunit beta [EC:
1.12.98.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00680
Methane metabolism
dsh01100
Metabolic pathways
dsh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Dshi_4135
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.98 With other, known, physiological acceptors
1.12.98.1 coenzyme F420 hydrogenase
Dshi_4135
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Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Motif
Other DBs
NCBI-ProteinID:
ABV95846
RoseoBase:
Dshi_4135
UniProt:
A8LUC9
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Position
pDSHI04:66739..68040
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AA seq
433 aa
AA seq
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MPADTLGPASRVPPDSPALRRVQAGDLCAGCGGCASIAPDKLRMALVEPGFLRPVQSAPL
SPVEEDTIAAICPGLGQRVEDAGRTPSVLWGPYLEMQTGWATDPDLRFAGSSGGALSMLL
CHLLETGAVDGVIQTAAAPQLSIGNGTVLSTRSEGVLAAAGSRYAPSAPLEGLHARLTAS
PAQRFAFVGKPCDVAALRALQEQDPGLAARVPVLLSFFCAGVPSLRGGLEVLAALEAPYQ
DTVAFRYRGNGWPGYATATLADGTTRQMSYHDSWGRILSRHVQHRCKICADGTGTAADLV
CADAWEADEKGYPLFDEQEGVSLIVARTVKGQQILAAAQAAGRLETAPFDPTILAAIQPG
QRERRRALLARLAGLRVCGRPVPDYRGLTLKAAAAQNPLGRNLRNFFGMIRRSLRRKPGR
PRLFTLPSGSSHD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacacactcggccccgcctcgcgcgtgccccctgacagccctgccttgcgt
cgggtccaggccggcgatctctgtgccggctgcgggggctgcgccagcatcgctcccgac
aagctgcgcatggccttggtggagcctggcttcctgcgcccggttcaatcggccccgctg
agcccggtcgaagaggacacgatcgccgcgatctgcccgggtctcggccaaagggtcgag
gatgcagggcggacaccctcggtgctctggggcccttatctggagatgcagacgggctgg
gccacggatccggacttgcgtttcgcaggctcttcggggggggcgctgtcgatgctgctg
tgtcatcttctggagacaggagcggtggatggggtgatccagaccgcagcggctccgcaa
ctcagcattggcaacggcacggtgctctccacccggtccgaaggcgttctggcagcagcc
gggtcccgctatgccccgtcggcgcccctggaggggctgcatgcgcgcctgaccgccagt
ccagctcagcgtttcgccttcgttggcaagccctgcgatgtcgctgccctgcgggccctc
caggagcaagacccgggtctagcagcgcgggtgccggttctgttgtcgtttttctgtgcc
ggggttccatccctgcgggggggcctggaggtgcttgcggcccttgaagcgccctaccaa
gatacggttgcgttccgctatcgcggcaatggctggccgggatatgccactgcgaccctc
gcggatggcaccacccggcagatgagttaccatgacagttggggcaggatcctgtcccgt
catgtccagcaccgatgcaagatctgtgccgacggcacaggtaccgcggcagaccttgtc
tgtgccgatgcatgggaagcagacgagaaaggttatcctctattcgatgaacaggagggc
gtcagcttgattgtggcccgtacggtgaaggggcagcagatcctggctgcggcccaagct
gctggacgtcttgagactgcaccgtttgatcccacgatcctcgccgccattcagccgggt
cagcgggaacgtcgacgggcgctcttggcgcgactagcgggcctgcgggtttgcgggcgc
ccggttcccgactatcgcggcctcaccttgaaggcggcggccgcccagaaccccttgggc
cgcaacctgcgtaactttttcggaatgataaggcgcagcctgcgccgtaagcccgggcgc
ccgcgcctctttacattgccttccggatcttcccatgactga
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