Dyadobacter sandarakinus: HWI92_12375
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Entry
HWI92_12375 CDS
T07768
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn01501
beta-Lactam resistance
dsn01503
Cationic antimicrobial peptide (CAMP) resistance
dsn02020
Two-component system
dsn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HWI92_12375
09132 Signal transduction
02020 Two-component system
HWI92_12375
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HWI92_12375
01503 Cationic antimicrobial peptide (CAMP) resistance
HWI92_12375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsn02000
]
HWI92_12375
02044 Secretion system [BR:
dsn02044
]
HWI92_12375
01504 Antimicrobial resistance genes [BR:
dsn01504
]
HWI92_12375
Transporters [BR:
dsn02000
]
Other transporters
Pores ion channels [TC:
1
]
HWI92_12375
Secretion system [BR:
dsn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HWI92_12375
RTX toxin transporter
HWI92_12375
Multiple protein transporter
HWI92_12375
RaxAB-RaxC type I secretion system protein
HWI92_12375
Antimicrobial resistance genes [BR:
dsn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HWI92_12375
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HWI92_12375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RRM_5
Nucleoporin_FG2
Motif
Other DBs
NCBI-ProteinID:
QRR01643
LinkDB
All DBs
Position
3079135..3080466
Genome browser
AA seq
443 aa
AA seq
DB search
MNLLGFSTNKKYIPLLLLLCGTPAFSQQTTDSLQITLDEAIAAALKNNYEIEIAKNNVEV
NTVLNNYGVAGGLPLVAANASNTEQITEINQKLTDGTEINRNAAAGNNTQANLSAGILLY
NGRRVVATKKRLGELQLQSQELLNSQIQNTIALVMTSYYDVVRQLSYLNTVRVSIQASEK
RLEILKVRKEAGMANNADIFQAQIDLNTLNQTFLDQQMIAQVAKTELLRVISMDPKAAVS
IRDTILVDGTMVLDDLLQRVVVNPDVKAADHQIRINELIVKETAALRYPTVRFNTAYNYS
RNQSAAGFTLLNRTVGPNAGLTLSVPIYNGSAFKRQQQAAEINTESAVLRRDIIVRDYNA
GMVKMYQTYVSSLAQLETQKQNYELSRQLLNLTLQRFELIQATIIDVREAQRSFEDAGYR
LINLNYAAKAAEIELKRLASSLQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttctcggattttctaccaacaaaaaatacatacccctgttgctgctcctgtgc
gggacgcccgcattcagccagcaaacgaccgacagcctgcagatcacccttgatgaggcc
atagctgccgcactcaaaaacaactacgagattgaaatagccaagaataatgttgaggtc
aatacggtcctcaacaactatggggtggcaggcgggctgccactggtagctgcgaatgcc
agtaacaccgagcaaatcaccgagatcaatcaaaaactgacggacggaaccgagatcaac
cggaatgctgccgcgggtaacaatacccaggcaaacttgtcggcgggtattttactttac
aatggccggagggttgtggccaccaaaaagcgccttggtgaactgcagctgcaaagccag
gaactgctcaactcgcaaatccagaataccattgcactggtgatgaccagctattatgac
gtggtgcgtcagcttagctatctgaataccgtgcgtgtatccatacaagcctcagaaaag
cggctcgaaatcctgaaagtgcgtaaagaggccggcatggccaataatgcggatattttt
caggcacaaattgacctgaataccctcaaccagacttttcttgaccagcaaatgatcgca
caggtagcgaaaacagagctgctgcgcgtaatttctatggatccgaaagcggcagtgtct
atccgtgacacgattcttgtggatggtaccatggtacttgacgaccttttgcagcgggtt
gttgtcaatcccgacgtaaaggctgctgatcatcagatccgcattaatgagctgatcgtg
aaggaaacagctgcgctgcggtatccgaccgtgcgctttaacacggcatataattactcc
cgtaaccagagtgcggcaggttttacccttttgaaccggaccgtcgggcccaatgccgga
ctgaccctttctgtgcccatttacaacggatcggcattcaaacggcagcagcaggcagca
gagatcaacacggaaagtgcagtactgaggcgggatatcattgtgagagattataatgcg
ggtatggttaaaatgtaccagacctacgtcagctcgctggcacagctggaaacccaaaag
cagaattatgagctcagccggcagctgctgaaccttactttacaacggtttgaactgata
caggcaaccatcatcgacgtcagggaggcacagcggagctttgaagacgccggttaccgc
ctgatcaatctgaattacgcagccaaagcagcagaaattgaattgaaacgcctcgcgagt
tccctgcaataa
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