Candidatus Desulfovibrio trichonymphae: RSDT_0280
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Entry
RSDT_0280 CDS
T05578
Symbol
tolC2
Name
(GenBank) multidrug efflux pump outer membrane subunit TolC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr01501
beta-Lactam resistance
dtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSDT_0280 (tolC2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSDT_0280 (tolC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dtr02000
]
RSDT_0280 (tolC2)
01504 Antimicrobial resistance genes [BR:
dtr01504
]
RSDT_0280 (tolC2)
Transporters [BR:
dtr02000
]
Other transporters
Pores ion channels [TC:
1
]
RSDT_0280 (tolC2)
Antimicrobial resistance genes [BR:
dtr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RSDT_0280 (tolC2)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RSDT_0280 (tolC2)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RSDT_0280 (tolC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6584
Motif
Other DBs
NCBI-ProteinID:
BAV91792
UniProt:
A0A1J1E2Y9
LinkDB
All DBs
Position
367364..368866
Genome browser
AA seq
500 aa
AA seq
DB search
MISTVKNCLALCLALLLAACSLAPNYERPGQDIPKEWRRVDLGSTPLYTDWWTRFNDPVL
TFMIAEALSTNLDLAESLARIDSAAAQAGVATSQLFPTVSGNAQALAQSDSEKGPNAAAF
TPQTGMSRSATNYQGSLNAAWELDFWGKYRNSYTALTDVLMNTVVGHEALLLSVAGQTAR
GYFTMLALDMQLATARRTLKSREDSFGIYTSRYRQGDITELDWQRARAEVEAARSQMHVT
TVALDQAEAALAVLLGRSPRDIMERAVERGKTIHALPSPPVLPEGLPSALLERRPDVRAA
EYMIMAYNAEIGAARTQLFPSISLTGVLGTLSAAVGNLFTGPAGVWNYGVTGSLPLLDFG
RNWYTVKDAKARKKASVAVYRKTVQKAFQDIRTALTSQREADAIVRSMQLQVQSLRRAVE
IARLQYDNGYSDYLTVLDAERQLFAAEMQLATGLRDRLEAVVSVCMALGGGWQDPKKSPA
CPVINTERLLDDVTGGPQRP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatctccactgtaaagaactgcctcgcgctgtgccttgcgctgctgctcgccgcctgc
tcccttgccccgaattatgaacgccccggccaggatatccctaaggaatggcgcagggtt
gatctgggttcaacgccgctttacacagactggtggacgcgttttaacgaccccgtgctc
acgttcatgattgctgaagccctgagtaccaatctggatctggcggaatcgctggcaagg
attgattccgccgcggctcaggccggcgttgccacgtcacaactctttcccacggtgagc
ggtaacgctcaggcgctcgcgcaaagcgattcggaaaaagggcccaatgccgccgcattc
accccgcagaccggtatgtcgcgctccgccaccaattatcagggatcgctcaatgcagcc
tgggagctggatttctgggggaaataccgtaacagctacacggcccttaccgacgtgctc
atgaacaccgttgtcgggcatgaagccttgcttctttctgtggccggccagacggcccga
ggctattttaccatgctcgcgcttgacatgcagcttgctacggcccgccgcaccctgaaa
agccgtgaggactccttcggcatctatacaagccgctacaggcagggtgacatcactgag
cttgactggcagcgcgccagggcagaggtggaagcagcccgatcccagatgcacgtcacc
acagtggcgcttgatcaggctgaagccgcgctcgctgtgctgcttgggcgttccccgcgc
gacattatggaacgcgccgtggagcgcggcaaaaccattcacgcgctcccctccccgcct
gttctgccggagggactcccctccgcacttttggagcgccggccggacgtgcgcgccgcg
gaatatatgattatggcctataacgccgaaatcggcgcggcgcgcacgcagcttttcccc
tccatttccctgaccggcgtgctcggcaccctcagcgcggctgtagggaatctgttcacc
ggacctgccggcgtgtggaattacggcgtgaccggcagcctgccccttctggatttcggc
cgcaactggtataccgtgaaagacgcgaaagccagaaaaaaagcttctgtcgccgtgtac
cgcaaaaccgtacagaaggcgtttcaggatatccgcacagcactgacgtcacagcgcgaa
gccgacgccattgtgcgcagcatgcagttgcaggtgcaaagtctgcgccgggcggtggag
atagcccgtctgcagtatgacaacggctacagcgattatctgacggtgctggacgccgaa
cgccagctctttgcggcggaaatgcagcttgcgacaggactgcgcgaccggcttgaggct
gtcgtcagcgtgtgcatggcacttggcggtggctggcaagatccgaagaaaagtcctgcc
tgccccgtgatcaatacagaacgcctgcttgacgatgtgaccggaggtccacaacggcca
tga
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