Duncaniella sp. B8: FDZ78_13185
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Entry
FDZ78_13185 CDS
T05963
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
dun
Duncaniella sp. B8
Pathway
dun01501
beta-Lactam resistance
dun01503
Cationic antimicrobial peptide (CAMP) resistance
dun02020
Two-component system
dun03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FDZ78_13185
09132 Signal transduction
02020 Two-component system
FDZ78_13185
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDZ78_13185
01503 Cationic antimicrobial peptide (CAMP) resistance
FDZ78_13185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dun02000
]
FDZ78_13185
02044 Secretion system [BR:
dun02044
]
FDZ78_13185
01504 Antimicrobial resistance genes [BR:
dun01504
]
FDZ78_13185
Transporters [BR:
dun02000
]
Other transporters
Pores ion channels [TC:
1
]
FDZ78_13185
Secretion system [BR:
dun02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FDZ78_13185
RTX toxin transporter
FDZ78_13185
Multiple protein transporter
FDZ78_13185
RaxAB-RaxC type I secretion system protein
FDZ78_13185
Antimicrobial resistance genes [BR:
dun01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FDZ78_13185
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FDZ78_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Herpes_UL82_83
Motif
Other DBs
NCBI-ProteinID:
QCP73431
UniProt:
A0AAE6BWD7
LinkDB
All DBs
Position
complement(3063794..3065275)
Genome browser
AA seq
493 aa
AA seq
DB search
MKQLRLLVFLFMLAAARPAGMAAEVRRITLDEAILTARSHSVDAAVALNELRTAYWTYRT
YRAELLPEINFSATAPGYRKSYSSYQLDDGSFTFVRNNYMEMNGEISVDQNIWLTGGTLS
LNTSIDYLKQLTGTRYNRFMSIPVALTLSQPIFGVNTIKWDRRIEPVRYAEAKAAFISAT
ENVAMTAINYYFSLLLSKENISIARQNLANAQKLYEVAKAKREMGQISKNDLLQLELNLL
NARSTLTDCESDYKANMFKLRAFLDIEDDVTLDPIVPDTIPQALVSYDDVLEKAHANNSF
AQNIRRRQLEADYQVAKAKGDQRQIMLYAQIGYTGTSDRFGEAYDRLKDNQVVEVGFKIP
ILDWGKRRGKVKVSESNREVVQSRLRKEQMEFDQNIFILVERFNNQRRQLEISLRADTIA
RQRYATNVETFMIGKISTLDLNDSQVSKDESRQAYINQLYLYWNYYYQLRSVALWDFSAN
RSIDADIEAIVRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaattaagattattggttttcctcttcatgcttgccgccgcgaggccggcaggc
atggcagcggaggtgcgtcgcataactctcgacgaagccatactgacagcgcggtcacac
agcgtagacgccgctgtcgcactcaacgaattgcgtaccgcctactggacataccgcacc
tatcgcgccgaacttctgccggaaatcaacttcagcgccacagctcccggctatcggaaa
agctacagcagctatcagctcgacgacggctcgttcacatttgtccgcaacaactatatg
gaaatgaacggcgagatctcggttgaccaaaacatctggcttaccggaggtactctgtcg
ctaaacacttcgatagactatctcaagcagctgaccggcacacgttacaaccgcttcatg
tcaattccggtggcactcacactctcccagcctattttcggtgtcaacaccatcaaatgg
gaccgccgcatcgagcccgtgcgctatgcagaagccaaagcggcttttatcagcgctact
gaaaacgtggccatgacggccataaactattatttctccctgctgctgtcaaaagaaaat
atttccattgcccggcagaatctggccaacgcacaaaaactttatgaagtggcaaaagcc
aagcgcgagatgggccagatcagcaaaaacgaccttctgcaacttgaactgaacctgctc
aacgcccgctcgacactcaccgactgcgaaagcgactacaaggcaaacatgttcaagctc
cgcgcctttcttgacatcgaggatgacgtgacgcttgacccaattgtccccgacacaatt
ccccaggcccttgtctcctatgacgatgtactcgaaaaggcacatgccaacaacagtttc
gcacagaacatccgccgccgtcagctcgaagccgactaccaagtggccaaggctaaagga
gaccagcgccagataatgctctacgcccagataggctacaccggcacgtctgaccgcttc
ggcgaggcatatgaccggctcaaggacaaccaggtggttgaagtcgggttcaaaattccc
attctcgactggggcaaacgccgcggcaaggtcaaagtcagcgaaagcaaccgcgaagtg
gtgcagagccgtctgcgcaaagagcagatggagttcgaccagaatatcttcatactcgtg
gagcgtttcaacaatcagcgccgccagctcgaaatctctctgagagccgacaccatagcc
cgccagcgctatgccaccaatgtagagacattcatgatcggtaaaatttccactcttgac
ctgaacgactcgcaggtgagcaaagatgaaagccgccaggcctacatcaaccaactctat
ctctactggaactattattatcagctccgcagcgtggccctctgggatttctcggccaac
cgaagcatcgacgctgacatagaagctattgtccgacgttga
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