Nitratidesulfovibrio vulgaris RCH1: Deval_0090
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Entry
Deval_0090 CDS
T02064
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg01501
beta-Lactam resistance
dvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Deval_0090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Deval_0090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvg02000
]
Deval_0090
01504 Antimicrobial resistance genes [BR:
dvg01504
]
Deval_0090
Transporters [BR:
dvg02000
]
Other transporters
Pores ion channels [TC:
1
]
Deval_0090
Antimicrobial resistance genes [BR:
dvg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Deval_0090
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Deval_0090
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Deval_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3450
IFT57
Motif
Other DBs
NCBI-ProteinID:
ADP85261
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All DBs
Position
115830..117344
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AA seq
504 aa
AA seq
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MIRRMTAMLLGAALLSGCAIGPDYQRPGMDLPSAWRAESADAGMVAGEKWWTLFGDATLD
ALEEEALAANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGSERGQNPPVEG
REVTDLHKASALASFELDLWGKYRRAHEAARAGLLGTEAAYATVRLAVVSQVAQSYFGLR
AADRQLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAA
AETALSSLLGRSPRDIVERSPERGLDIETFAVPPQIPAGLPAGLLARRPDVARAEADLHY
ATASIGVAKADLLPAISLTGLMGYESIDLTRLVSSSSGTWSYGASATMPLLDFGRTLANI
DMADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERSLTLARLRY
ENGYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGGWKAPGEEGADATGAA
EAASGDADDAAPQGVAPTPPRTEG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatacggcgcatgaccgcgatgctgcttggcgccgccctgctttcgggctgcgccatc
ggccccgactatcagaggcccggtatggacctgccctccgcatggcgtgctgaaagcgcc
gatgcgggcatggtggcgggcgagaaatggtggacgctcttcggggacgccacactcgac
gcccttgaagaggaggcgctggcggccaacggcgaccttgccacggccatggccaacgtg
gatgcttcgcgggcacagctcaccgtggcgacatcgtacctgctgccctccatcaccggt
cagggttcgtcggtacgccagcgcggttcggagcgtggacagaatccgcccgtcgaaggc
cgcgaggtgaccgacctgcacaaggcttcggcccttgcctcgttcgaactcgacctgtgg
ggcaagtaccgcagggcgcatgaggccgcacgtgccggacttctcggcaccgaggccgcc
tatgccacggtgcggcttgccgtggtgtcgcaggtggcgcagtcgtacttcggcttgcgt
gccgcagacaggcagctcgacatcgcccgccagaccctcacctcgcgtgaggagtcgctc
aagatacgagaagcccgcttcaactcggggctcacctccgagctcgactaccggcaggca
caggccgagacggcctccgcaagagcttccgtgcggcaactcgaacaggccgtggccgct
gccgagacggcactctcgtcgctgctgggacgcagcccgcgtgacatcgtcgagcgcagc
cccgaacgcggtctcgacatcgagaccttcgccgtgccgccgcagattcccgccgggttg
cccgccgggcttctggcccgtcgtcctgacgtggcgcgcgccgaggccgacctgcattat
gccaccgcctccatcggcgtggccaaggccgacctcctgcccgccatctccctgacgggg
ctcatggggtatgagagcatagacctcacccgtctcgtgtcctcgtcatcggggacctgg
agttacggggccagcgccaccatgccgttgctcgacttcgggcgtaccctcgccaacatc
gacatggccgacgccaagcagcgtgcggcactcgccgcctatgagcaggccgtgcgtgac
gccttccgcgagacgcaggacgccctcgtggccaatcgcaagacgcggcaggtggtggat
gcacaggccacgcaggtggcggcgctcgagcgttcgctcactctcgcgcgactccgctat
gagaacggctattccagctacctcgaagtgctcgatgcggagcgcagcctctttcaggcc
caactgaacctggtagaggcccggcgcaaccagctggatgcggtggtgcaggtctgcaag
tcgcttggcggaggatggaaggcccccggcgaagagggcgcggatgctacaggggcggca
gaggccgcttccggcgacgccgatgacgccgccccgcagggtgttgcccccacccctccc
cggacggagggctaa
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