Dyadobacter chenhuakuii: NFI80_01995
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Entry
NFI80_01995 CDS
T08460
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc01501
beta-Lactam resistance
dyc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFI80_01995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI80_01995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dyc02000
]
NFI80_01995
01504 Antimicrobial resistance genes [BR:
dyc01504
]
NFI80_01995
Transporters [BR:
dyc02000
]
Other transporters
Pores ion channels [TC:
1
]
NFI80_01995
Antimicrobial resistance genes [BR:
dyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI80_01995
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NFI80_01995
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NFI80_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SAM_CEP-1_C
Motif
Other DBs
NCBI-ProteinID:
USJ31515
LinkDB
All DBs
Position
complement(474594..476015)
Genome browser
AA seq
473 aa
AA seq
DB search
MKPKFRQLYIPLSLLATVLIASCKVSKDYQRPEVALPTQYRNVTFADTATIADMEWRKFF
PDTTLQGLIQRGLSYNYDLQLALKRIDVAEQQVKQAKFLQIPTLDLQITGTYNRPSSNSL
NGLSASNFLKSKHIENYLGAVNLSWEADIWGKIRRQQQATLGQYLQTYEATKAVQTKLVA
DIAKGFFNLLMLDKQLAIAKSNLELSDNTLRLTRLLKDAGEVTSLSIQQSEAQRESIALL
LPQLEQDIAIQENALQILTGQMPDSIARNVQLSDFNATDSLATGVPAGVLSRRPDVRAAE
MSVLVANAQLGVAQASMYPSLIITAAGGIESFKSSNWFNIPGSLFGLAAGTIARPILARR
ELKTNLEVAKIQREQSVIQFRQSVLNAVGEVSNSLVQTQKLKEQEAIANNQVTILQAAIT
NAQLLYKSDMANYLEVITAQGNALQAELNLAFIRSQSLIARVDLYRSLGGGWK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaaatttagacaattatatatcccgctttccctgctggcaacggtgctgatc
gcctcctgcaaagtgagcaaggactatcagcggccggaagtcgccctgcctacccagtat
cgcaatgtcacttttgccgacacggctaccattgcggacatggaatggagaaaattcttc
cctgacactacattgcaagggcttatccagcgcggattgtcctataattatgacttgcaa
ctggctttgaaacgtattgacgtggccgagcagcaagttaaacaggcgaaatttttacag
atcccgacactggatttacagattacaggcacctacaaccgtccttccagcaacagtttg
aacggacttagtgcaagtaattttctaaaatcgaagcacattgaaaactatctcggcgca
gtgaacctgagctgggaagcagacatctggggcaagatccgcaggcagcagcaggctaca
ttaggccagtatctgcaaacctatgaagcaacaaaagcggttcaaaccaagcttgttgcg
gacattgccaagggtttcttcaatcttttaatgctggacaaacaactggcaattgccaaa
agcaacctggaattgagcgataatactttgcgcctgacccgtcttttgaaagatgcagga
gaggttacctcgctttctatccaacaatccgaagcccagcgcgagtccatcgccttgctt
cttccgcagctggaacaggacattgcgattcaggaaaatgccttgcaaatactgaccgga
caaatgcctgacagcattgcgcgcaacgtgcagctctccgatttcaatgcaaccgacagc
ctggcaaccggtgtgccggcaggtgttttgagccgccgtcctgatgtcagagctgctgaa
atgtccgttttggtggccaatgcgcaattgggtgttgcacaggcaagtatgtatccttca
ctgattattactgcagccggcgggatcgaatcgttcaaatccagcaactggttcaacatt
ccgggatcattgtttggcttggcggcagggaccattgcgcgtcctattctggcaagacga
gagttgaaaaccaatctggaagttgccaaaatacagcgcgaacagtcggtgatccagttc
cgtcagtcggtgctgaatgcggtgggcgaggtttctaattctttggttcaaacccaaaaa
ttgaaagagcaggaagcgatcgccaataatcaggtaactattttacaggcagccattacc
aatgcacaattactttacaaaagtgatatggccaattatctggaggtgatcactgcacag
ggcaatgctttacaagctgaactgaacctcgcattcatccgcagccagtctctcattgcc
cgggtagatctttaccggagcctaggcggcggttggaaatga
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