Dyadobacter chenhuakuii: NFI80_23120
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Entry
NFI80_23120 CDS
T08460
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc01501
beta-Lactam resistance
dyc01503
Cationic antimicrobial peptide (CAMP) resistance
dyc02020
Two-component system
dyc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NFI80_23120
09132 Signal transduction
02020 Two-component system
NFI80_23120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI80_23120
01503 Cationic antimicrobial peptide (CAMP) resistance
NFI80_23120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dyc02000
]
NFI80_23120
02044 Secretion system [BR:
dyc02044
]
NFI80_23120
01504 Antimicrobial resistance genes [BR:
dyc01504
]
NFI80_23120
Transporters [BR:
dyc02000
]
Other transporters
Pores ion channels [TC:
1
]
NFI80_23120
Secretion system [BR:
dyc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NFI80_23120
RTX toxin transporter
NFI80_23120
Multiple protein transporter
NFI80_23120
RaxAB-RaxC type I secretion system protein
NFI80_23120
Antimicrobial resistance genes [BR:
dyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NFI80_23120
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NFI80_23120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CEMIP_X
Motif
Other DBs
NCBI-ProteinID:
USJ30737
LinkDB
All DBs
Position
5519018..5520511
Genome browser
AA seq
497 aa
AA seq
DB search
MLKSLRKSALLFIVFCVCVAGNTAFAQKDTSQAANTYSLEDCIRIALETNPSIKISELTV
QTNGNIYAQSKWQRWPSISFSASQGFSSGRNIDPFTNQFVQQNVNSNNYQLGGQLTLFNG
FQIKNNIKFNNENYKASAKDLDAARNDIMLNVALSYLQVMTNIELIGVARLQVEASQLQV
DRTAKLVEAGTLAESNLLDLKAQLANDELTLVNAENNLETAKLNLKQFMNMPGSEPINVV
MIQVADPTLQAYDATIQEIFEVALGNLPQMQAAELRIAAAKTNIDLAKGAALPSLTLNGG
IYTAYSSAAPKERFVSDGSGTKITEVISPTDYIIVNSQQLPIVQKIETPNGALRTFGYLD
QLNFNRNSAINLNLTIPIFTNFRVKYNVANAKIQQKTYEYQAQQVQLTIRKNVEQAYIDM
TNAAKRYSATANQVQALQETFRVSQVRFDVGAINSVEYNIAKANLDRANGNLVQAKYDYV
FRTKILDFYMNRPLSDF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatcgttacgcaaatccgcactgctgtttattgtattttgtgtatgtgttgcg
ggaaacacagccttcgcacagaaagataccagccaggcagccaatacttactcactcgaa
gattgcatccggattgcgctggaaaccaatccttccataaaaatttcagagcttaccgtt
cagaccaacggcaacatttacgcccaatccaaatggcagcgctggccaagcattagtttc
agcgccagccagggtttcagttcgggtagaaatatcgatccttttaccaaccagtttgtg
cagcagaatgtgaactcgaacaactatcagctaggcgggcagctcacattgttcaatggt
tttcagataaaaaataatatcaagttcaataatgaaaattacaaggcaagcgccaaagac
ctggatgctgcccgaaatgacattatgctgaatgttgcattgtcctatctgcaagtgatg
accaacattgagctcatcggagtggcgaggctgcaagtggaagcatcccagcttcaagtc
gaccggactgctaagctcgttgaagcaggtacattggcagaaagcaatctgctcgacctt
aaagcgcagcttgctaacgacgagctcacattggttaatgccgaaaacaaccttgaaact
gcgaagttgaatttgaaacagtttatgaatatgcccggcagtgagcctattaacgtggtt
atgatccaggtagctgacccaactttgcaagcttatgatgccacgatccaggagatattt
gaagtagccctcggtaatctgccacaaatgcaagctgcggaattacgcattgcagcagca
aaaacgaacattgatctggcaaaaggcgcagctttaccttccttaacattaaacggaggg
atttacacagcctattccagcgcagctccaaaggaacgttttgtgtccgacggttcagga
actaagatcaccgaagtaatttcgccgaccgattacatcatcgttaacagccagcagctg
cccatcgtccagaaaattgaaacgccaaatggtgcccttcgcacattcggttacctggat
cagctgaacttcaacagaaactcggccattaatctcaatttaaccattccgatttttacc
aatttcagggtgaaatacaatgttgccaatgccaagattcagcaaaaaacatatgaatat
caggcgcagcaggttcagttgacgatccgtaaaaatgtggaacaggcttacattgatatg
acaaatgcagccaagcgctactcggcaacggccaatcaggtgcaggcgttacaggaaaca
ttccgcgtttcccaggttcgttttgatgttggcgcaatcaactccgtggaatacaacatt
gctaaggcaaatctggacagagcgaatggtaatcttgttcaggctaaatatgactatgtt
ttccgaaccaagatccttgatttttatatgaaccgtccgttatcggatttttaa
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