Dyella sp. GSA-30: DYGSA30_35640
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Entry
DYGSA30_35640 CDS
T10269
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dyg Dyella sp. GSA-30
Pathway
dyg01501
beta-Lactam resistance
dyg02024
Quorum sensing
Module
dyg_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DYGSA30_35640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DYGSA30_35640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dyg02000
]
DYGSA30_35640
01504 Antimicrobial resistance genes [BR:
dyg01504
]
DYGSA30_35640
Transporters [BR:
dyg02000
]
Other transporters
Pores ion channels [TC:
1
]
DYGSA30_35640
Antimicrobial resistance genes [BR:
dyg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DYGSA30_35640
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DYGSA30_35640
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DYGSA30_35640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Scaffolding_pro
Motif
Other DBs
NCBI-ProteinID:
BDU22107
LinkDB
All DBs
Position
complement(4240673..4242127)
Genome browser
AA seq
484 aa
AA seq
DB search
MNMKYSRTALTVSLALLLGGCMVGPDYQRPQVSVPATYKELPGWQAASPEAADAPKGNWW
AGFHDPLLDRLEPMVSVSNQTVRQSYANYQEALAEVQVARSSLFPTIGISGSGTRQRSAS
SNFGNSTTASRGVVNSGSLEGNVSWAPDLWGKVRRTIEENKATAEASQATLANATLSEQT
ALATAVIDLRVADANIDLLQKTVDAYKEFLRVVANQGSAGITPPSDVIAARTQLENAQSS
LIALGVSRAKDAHAIAVLVGKNPEELDLPHDATIPTLPSIPAGVPSTLLQRRPDIAVAER
QMAAQNAAIGVAIAAYYPDLSLTGADGFSQSPLAGLLHVANHVWSLGADVSETVFDGGAR
HGQVAAARAAYEAAIANYRGTVLTAFQNVEDDLSGLRILAQQAEVLDAAVNDAKRGSEIA
FNEYQAGTVDYTTAATAQTTYLNTQQSALSVQQQRLLDAVSLIGDLGGVPDNDAPDAKTA
AAGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaatattcccgcaccgctttaaccgtatccctggcattgctgctcggcggc
tgcatggtcgggcccgactatcagcgtccccaggtaagtgtgccggctacgtacaaagaa
ctgcccggttggcaggcggcttccccggaggcggccgacgcgcccaagggcaactggtgg
gccggtttccacgatccgttgctcgaccgtctcgaaccgatggtctcggtgtccaaccag
accgtgcgccagagttacgccaattaccaggaggcgttggccgaggtgcaggtcgcgcgc
agctccctgtttcccaccattggcatttcaggctcgggaacccggcagcgcagcgcgagc
agcaacttcggcaatagcacgacagcctccaggggcgtggtgaattccggttcgttggag
ggcaatgtcagttgggcgccagatctgtggggcaaggttcgccgcacgatcgaagagaac
aaggcgacggccgaagcgagccaggcgaccttggccaatgcgacgctgtcggagcaaacc
gcattggccaccgcggtcatcgacctgcgcgtggcggatgccaatatcgatctgctgcag
aagacggtcgacgcgtacaaggagtttctgcgtgtcgtggccaaccagggctcggcgggt
attacgccgccgtcggatgtgatcgccgcgcgtacgcaactggaaaacgcgcagtcgagt
ttgatcgcgctgggcgtgtcgcgtgcgaaagacgctcatgctattgccgtattggtcggc
aagaacccggaagagctggatctgccgcacgatgcgacgataccgaccttgccgtcgatt
cctgcgggcgtcccgtcgacgttgctgcagcgccgcccggatatcgccgtggccgagcgc
cagatggccgcgcagaatgcggcgatcggcgtcgcgatcgccgcgtattatccggacctg
tcattgacgggtgccgacggcttttcgcaatcgccgctggccggcttgctgcatgtcgcc
aatcatgtgtggtcgctgggtgccgacgttagcgagaccgtgtttgatggcggcgctcgt
catgggcaggttgccgctgccagggcagcttacgaggcggccattgccaattatcgaggt
acggtgctgacggcatttcagaacgtggaagacgacctgtcgggtctgcgtatcctcgcg
cagcaggccgaggtgctggacgcggcggtgaacgatgcgaagcgcggttcggagattgct
ttcaacgaataccaggcgggcaccgtcgactacaccacggcggccacagctcagacgacc
tacctcaatacccagcagtcggcgctgagcgtgcagcagcagcgtctcttggacgccgta
tcgttgatcggcgatcttggcggtgtgccggataacgatgctcctgacgcgaaaactgcg
gcggctgggcgttga
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