KEGG   Escherichia coli K-12 BW2952: BWG_3562
Entry
BWG_3562          CDS       T00913                                 
Symbol
fdoI
Name
(GenBank) formate dehydrogenase-O, cytochrome b556 subunit
  KO
K00127  formate dehydrogenase subunit gamma
Organism
ebw  Escherichia coli K-12 BW2952
Pathway
ebw00630  Glyoxylate and dicarboxylate metabolism
ebw00680  Methane metabolism
ebw01100  Metabolic pathways
ebw01120  Microbial metabolism in diverse environments
ebw01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:ebw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BWG_3562 (fdoI)
  09102 Energy metabolism
   00680 Methane metabolism
    BWG_3562 (fdoI)
SSDB
Motif
Pfam: Ni_hydr_CYTB DUF4405 PepSY_TM PapJ
Other DBs
NCBI-ProteinID: ACR63131
LinkDB
Position
complement(3968917..3969552)
AA seq 211 aa
MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFV
GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII
FLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA
MVEGWVTSAWAKKHHPRWYREVRKTTEKKAE
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaaacgacgtgacaccatcgtgcgctacaccgcgccggaacgtatcaaccactggatc
accgccttctgcttcatcctggcggcggtgagcgggctgggctttttgttcccgtccttc
aactggttgatgcaaatcatgggcacaccgcagctggcgcgaattctgcacccgtttgtc
ggcgtggttatgtttgcctcgttcatcatcatgtttttccgttactggcatcacaaccta
atcaatcgggatgatatcttttgggcgaagaatattcgtaagatcgtcgtcaacgaggaa
gtaggtgacaccgggcgttataacttcggtcagaaatgcgttttctgggcggcgattatt
ttcctggttctgctgctggtgagcggcgtgattatctggcgtccttattttgcgcctgct
ttctcaatcccggtgatccgattcgcgttaatgctgcattcatttgccgcagtggcgtta
attgtggttatcatggtgcatatctacgccgccctttgggtgaaaggcacgattaccgcc
atggtggaaggatgggttaccagcgcctgggcgaagaaacatcacccgcgctggtaccgt
gaggtccgcaagacaacggaaaagaaagctgaatga

KEGG   Escherichia coli K-12 BW2952: BWG_3563
Entry
BWG_3563          CDS       T00913                                 
Symbol
fdoH
Name
(GenBank) formate dehydrogenase-O, Fe-S subunit
  KO
K00124  formate dehydrogenase iron-sulfur subunit
Organism
ebw  Escherichia coli K-12 BW2952
Pathway
ebw00630  Glyoxylate and dicarboxylate metabolism
ebw00680  Methane metabolism
ebw01100  Metabolic pathways
ebw01120  Microbial metabolism in diverse environments
ebw01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:ebw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BWG_3563 (fdoH)
  09102 Energy metabolism
   00680 Methane metabolism
    BWG_3563 (fdoH)
SSDB
Motif
Pfam: Fer4_11 Form-deh_trans Fer4_7 Fer4_9 Fer4_10 Fer4_21 Fer4_6 Fer4_2 Fer4 Fer4_17 Fer4_16 Fer4_3 Fer4_4 Fer4_8 Fer4_22 Fer4_20 Fer4_18
Other DBs
NCBI-ProteinID: ACR63132
LinkDB
Position
complement(3969549..3970451)
AA seq 300 aa
MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVG
NNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQ
YANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCP
TGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL
PENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK
NT seq 903 nt   +upstreamnt  +downstreamnt
atggcttatcaatctcaagatatcattcgtcgttccgcgactaacggtctgacccccgcg
cctcaggcgcgggacttccaggaagaagtggcgaaactcatcgacgttaccacctgtatc
ggctgtaaagcctgtcaggtggcgtgttcagagtggaacgacattcgcgataccgtcggc
aataacattggggtgtacgacaaccccaatgatttaagcgccaaatcgtggacggtaatg
cgcttctcggaagtggagcagaacgacaaactggaatggctgatccgcaaagacggctgt
atgcactgttccgatccaggctgcctgaaagcgtgcccggcggaaggtgcaattattcag
tatgccaacggtatcgtcgacttccagtccgagcagtgcattggctgcggttattgcatt
gcgggctgtccgttcgacattccgcgcctcaacccggaagacaaccgcgtctacaaatgt
acgctgtgcgttgaccgcgtggtggttgggcaagaaccagcctgcgtgaagacctgccca
acgggcgcgattcacttcggtacgaaagagtcgatgaaaacgctggcgagcgagcgcgtt
gctgagctgaaaacccgcggttacgacaatgcgggtctgtacgatccggcaggcgtcggt
ggtacacacgtcatgtacgtgctgcaccatgctgacaagccaaatctgtatcatggcttg
ccggagaacccggaaatcagcgaaaccgtgaaattctggaaaggcatctggaaaccgctc
gcggctgttggctttgcggctacctttgcggccagtatcttccactacgtgggtgtcggt
ccgaaccgtgcggatgaggaagagaataatctgcacgaagagaaagacgaggagcgcaaa
tga

KEGG   Escherichia coli K-12 BW2952: BWG_3564
Entry
BWG_3564          CDS       T00913                                 
Symbol
fdoG
Name
(GenBank) formate dehydrogenase-O, large subunit
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
ebw  Escherichia coli K-12 BW2952
Pathway
ebw00630  Glyoxylate and dicarboxylate metabolism
ebw00680  Methane metabolism
ebw01100  Metabolic pathways
ebw01120  Microbial metabolism in diverse environments
ebw01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:ebw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BWG_3564 (fdoG)
  09102 Energy metabolism
   00680 Methane metabolism
    BWG_3564 (fdoG)
Enzymes [BR:ebw01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     BWG_3564 (fdoG)
SSDB
Motif
Pfam: Molybdopterin Molybdop_Fe4S4 Molydop_binding
Other DBs
NCBI-ProteinID: ACR63133
LinkDB
Position
complement(3970464..3973514)
AA seq 1016 aa
MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLL
MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK
WQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKF
SRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVG
FRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNRE
YTEAYTTASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCV
WNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQ
NIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQT
YLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQY
FEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELN
EVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRL
RKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQ
LSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILY
NRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALD
KMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTE
HFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRT
LKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgcaggtcagcagaaggcagttctttaagatctgcgctggcggtatggcaggcaccacg
gcagcggcactgggttttgcacccagcgtagcactcgcggaaacccggcagtataaactg
ctgcgcacccgcgaaacccgtaatacctgcacctattgttccgtaggctgtgggctgttg
atgtacagcctcggtgacggagcaaaaaacgccaaagcatctatcttccatatcgaaggc
gatccggatcacccggtcaaccgcggtgcactttgtccgaaaggcgctggcctggtggat
ttcatccactccgaaagccgtctgaagtttccggaataccgtgcgccaggttctgataaa
tggcagcaaatcagttgggaagaggcgtttgatcgcatcgccaaactgatgaaagaagac
cgcgatgctaactacattgcgcaaaacgccgaaggcgtgactgttaaccgctggctctcc
accgggatgctgtgtgcttccgcgtcgagtaacgaaaccggctatttaacgcaaaaattc
tcccgcgcgctgggtatgctcgcggtcgacaaccaggcgcgtgtctgacacggaccaacg
gtagcaagtcttgctccaacatttggtcgcggtgcgatgaccaaccactgggtcgacatc
aagaacgccaacctcgtcgtggtgatgggcggtaacgccgctgaagctcacccggtcggg
ttccgctgggcgatggaagccaaaattcacaacggcgcgaagctgattgtgatcgatcct
cgctttacgcgtacggcggcggtagctgactactatgcccctattcgttccggtactgac
attgctttcctgtcaggcgtattgctgtacctgctgaacaatgaaaaattcaaccgcgaa
tacaccgaagcctataccaccgccagcctgatcgtgcgtgaggattacggctttgaagat
ggcctgttcaccggctacgacgcggaaaaacgcaagtacgataaatcctcctggacttat
gaactggacgaaaacggcttcgccaaacgcgataccacgctgcaacatccgcgctgcgtg
tggaacttgctgaaacagcacgtttcccgctacacgccagatgtggttgaaaacatctgt
ggtacgccaaaagacgcgttcctgaaagtctgcgaatacatcgcagaaaccagtgctcac
gataaaactgcctcgttcctgtatgccctcggctggacgcaacactccgttggtgcgcaa
aacattcgtacgatggcgatgatccagctgctgctcggcaatatggggatggcaggcggc
ggcgttaacgccctgcgcggtcactccaatattcaggggctgacggacctggggctgctg
tcgcagagcctgccaggttacatgacgctgccaagcgagaagcagaccgatctgcaaacc
taccttaccgccaacacgccaaaaccgctgctggaaggccaggtaaactactggggcaac
tacccgaaattcttcgtctctatgatgaaggccttctttggtgataaagcgacggcggaa
aatagctggggctttgactggttgccgaagtgggataaaggctacgacgtcctgcaatac
ttcgagatgatgaaagagggcaaggtcaatggctatatctgccagggctttaaccctgtt
gcctcattcccgaacaaaaacaaagtgatcggttgtctgtcgaaactgaagttcctcgtc
accatcgacccactgaacactgaaacctctaacttctggcagaaccacggtgagctgaac
gaagttgactcgtcgaagatccagaccgaagtgttccgtctgccatcgacctgcttcgcg
gaagagaacggttctatcgttaactcaggtcgctggttacagtggcactggaaaggtgcg
gacgccccggggattgcgctgactgacggcgagatcctctccggtatcttcctgcgcttg
cgcaagatgtatgccgaacagggtggcgcgaacccggaccaggtgctgaacatgacatgg
aactacgccattccgcatgagccatcttcagaagaagtggcgatggagagcaacggtaag
gcgctggccgatattaccgatccggcaaccggtgcggttatcgtcaagaaaggccaacaa
cttagttcgttcgcccaattgcgcgatgacggtacaacctcctgtggctgctggattttc
gccggtagctggacgccggaaggcaaccagatggcacgccgtgataacgccgatccgtct
ggcctcggtaacacgctgggctgggcatgggcatggccgcttaaccgccgcattctgtat
aaccgcgcctccgcagatccgcagggtaacccgtgggatccgaagcgtcagttgctgaaa
tgggacggcactaagtggaccggctgggatattccggactacagcgcagcgcctccgggt
agcggcgtcgggccgtttatcatgcagcaggaaggcatggggcgtctgtttgccctcgat
aagatggcggaaggtccgttcccggaacactacgagccgtttgaaacgccgctgggaact
aacccgctgcatccaaacgttatctcgaacccggctgcacgtatctttaaagacgacgcc
gaagcattgggtaaagccgataagttcccgtatgtcggaaccacctatcgtctgaccgag
cacttccactactggaccaaacacgcgctgttgaacgcgattttgcagccagagcagttt
gtggaaatcggggagtcgctggcgaataaacttggcattgcccagggcgataccgtgaaa
gtctcctccaaccgtggctatatcaaagccaaagcggtggtgaccaaacgtattcgcacg
ctgaaagcgaacggcaaagatatcgataccatcggtattccgattcactggggctatgaa
ggcgtagctaaaaaaggctttattgccaatactttaacgccattcgttggtgatgcgaac
acgcagacgccggagtttaagtccttccttgtgaatgtggaaaaggtgtaa

KEGG   Escherichia coli K-12 BW2952: BWG_3793
Entry
BWG_3793          CDS       T00913                                 
Symbol
fdhF
Name
(GenBank) formate dehydrogenase-H, selenopolypeptide subunit
  KO
K22015  formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:1.17.98.4 1.17.98.5]
Organism
ebw  Escherichia coli K-12 BW2952
Pathway
ebw00680  Methane metabolism
ebw00720  Other carbon fixation pathways
ebw01100  Metabolic pathways
ebw01120  Microbial metabolism in diverse environments
ebw01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:ebw00001]
 09100 Metabolism
  09102 Energy metabolism
   00720 Other carbon fixation pathways
    BWG_3793 (fdhF)
   00680 Methane metabolism
    BWG_3793 (fdhF)
Enzymes [BR:ebw01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.98  With other, known, physiological acceptors
    1.17.98.4  formate dehydrogenase (hydrogenase)
     BWG_3793 (fdhF)
    1.17.98.5  hydrogen-dependent carbon dioxide reductase
     BWG_3793 (fdhF)
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Molybdop_Fe4S4
Other DBs
NCBI-ProteinID: ACR63127
LinkDB
Position
complement(4233977..4236124)
AA seq 715 aa
MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP
RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADS
HPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLY
DKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVT
QFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDP
ANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFE
DLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQ
IISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGT
SYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAA
LADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGA
CNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgaaaaaagtcgtcacggtttgcccctattgcgcatcaggttgcaaaatcaacctggtc
gtcgataacggcaaaatcgtccgggcggaggcagcgcaggggaaaaccaaccagggtacc
ctgtgtctgaagggttattatggctgggacttcattaacgatacccagatcctgaccccg
cgcctgaaaacccccatgatccgtcgccagcgtggcggcaaactcgaacctgtttcctgg
gatgaggcactgaattacgttgccgagcgcctgagcgccatcaaagagaagtacggtccg
gatgccatccagacgaccggctcctcgcgtggtacgggtaacgaaaccaactatgtaatg
caaaaatttgcgcgcgccgttattggtaccaataacgttgactgctgcgctcgtgtctga
cacggcccatcggttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgct
attaacgaaattgataataccgatttagtgttcgttttcgggtacaacccggcggattcc
cacccaatcgtggcgaatcacgtaattaacgctaaacgtaacggggcgaaaattatcgtc
tgcgatccgcgcaaaattgaaaccgcgcgcattgctgacatgcacattgcactgaaaaac
ggctcgaacatcgcgctgttgaatgcgatgggccatgtcattattgaagaaaatctgtac
gacaaagcgttcgtcgcttcacgtacagaaggctttgaagagtatcgtaaaatcgttgaa
ggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcag
gcggcacggatgtatgcccaggcgaaaagcgccgccatcctgtggggcatgggtgtaacc
cagttctaccagggcgtggaaaccgtgcgttctctgaccagcctcgcgatgctgaccggt
aacctcggtaagccgcatgcgggtgttaacccggttcgtggtcagaacaacgttcagggt
gcctgcgatatgggcgcgctgccggatacgtatccgggataccagtacgtgaaagatccg
gctaaccgcgagaaattcgccaaagcctggggcgtggaaagcctgccagcgcataccggc
tatcgcatcagcgagctgccgcaccgcgcagcgcatggcgaagtgcgtgccgcgtacatt
atgggcgaagatccgctacaaactgacgcggagctgtcggcagtacgtaaagcctttgaa
gatctggaactggttatcgttcaggacatctttatgaccaaaaccgcgtcggcggcggat
gttattttaccgtcaacgtcgtggggcgagcatgaaggcgtgtttactgcggctgaccgt
ggcttccagcgtttcttcaaggcggttgaaccgaaatgggatctgaaaacggactggcaa
atcatcagtgaaatcgccacccgtatgggttatccgatgcactacaacaacacccaggag
atctgggatgagttgcgtcatctgtgcccggatttctacggtgcgacttacgagaaaatg
ggcgaactgggcttcattcagtggccttgccgcgatacttcagatgccgatcaggggact
tcttatctgtttaaagagaagtttgataccccgaacggtctggcgcagttcttcacctgc
gactgggtagcgccaatcgacaaactcaccgacgagtacccgatggtactgtcaacggtg
cgtgaagttggtcactactcttgccgttcgatgaccggtaactgtgcggcactggcggcg
ctggctgatgaacctggctacgcacaaatcaataccgaagacgccaaacgtctgggtatt
gaagatgaggcattggtttgggtgcactcgcgtaaaggcaaaattatcacccgtgcgcag
gtcagcgatcgtccgaacaaaggggcgatttacatgacctaccagtggtggattggtgcc
tgtaacgagctggttaccgaaaacttaagcccgattacgaaaacgccggagtacaaatac
tgcgccgttcgcgtcgagccgatcgccgatcagcgcgccgccgagcagtacgtgattgac
gagtacaacaagttgaaaactcgcctgcgcgaagcggcactggcgtaa

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