Escherichia coli SMS-3-5 (environmental): EcSMS35_0905
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Entry
EcSMS35_0905 CDS
T00672
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm01501
beta-Lactam resistance
ecm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcSMS35_0905
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EcSMS35_0905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_0905
01504 Antimicrobial resistance genes [BR:
ecm01504
]
EcSMS35_0905
Transporters [BR:
ecm02000
]
Other transporters
Pores ion channels [TC:
1
]
EcSMS35_0905
Antimicrobial resistance genes [BR:
ecm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EcSMS35_0905
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EcSMS35_0905
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
EcSMS35_0905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Autoind_bind
GAF
HTH_NDX
Motif
Other DBs
NCBI-ProteinID:
ACB16970
UniProt:
B1LN30
LinkDB
All DBs
Position
911930..913366
Genome browser
AA seq
478 aa
AA seq
DB search
MNRDSFYPAIACFPLLLMLAGCAPMHETRQELSQQTPAAQVDTALPTALKNGWPDSQWWL
EYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSAE
GLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARVAEREQT
RQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTLIVTDRQLYQNGITSSVEGVETDINA
SKTRQQLNDVAGKMKIIEARLSALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRAD
LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPI
FDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDAL
RVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgattctttttatccagccatcgcctgttttccgctgttactgatgctggcc
gggtgtgcgcctatgcatgaaacccgccaggagttaagccagcaaacacccgcggcacaa
gttgacaccgcattacccacggcgctgaaaaatggttggccagacagccaatggtggctg
gagtatcacgataatcaactcacttcattaattaacaatgcactacagaacgcaccggat
atgcaggtggctgaacagcgcattcagctggctgaagcccaggcgaaggcagttgccact
caggatggtccgcagctcgacttttctgcggatatggagcggcaaaaaatgtcggcagaa
gggttaatggggccgtttgctttgaacgatccggccgcaggtacgaccggtccgtggtac
accaacggtacttttggcttaacggcgggctggcatctcgatatctggggaaagaatcgg
gcggaggtaactgctcgcctgggtacggttaaagcacgggtggcggaacgcgagcaaacc
cgccaattgctggctggcagcgtagcccgcctgtactgggagtggcaaacccaggcggcg
ttaaacacggtcttgcagcaaatcgaaaaagagcagaacacccttatcgtgaccgatcgc
cagctatatcagaacgggattacttcttcagttgaaggtgtggaaaccgatattaatgcc
agcaaaacccggcagcagctcaacgatgtcgcggggaaaatgaaaattattgaggcacgg
ttaagtgcgctcaccaaccaccagacaaagtcattgaagcttaaaccggtcgcgttgccg
aaagtggcaagtcagcttcctgatgaactcgggtactccttactggcccggcgggcagat
ttgcaggcggcgcactggtacgttgagtcatcgttaagcactattgatgcggcaaaagcg
gcattttatcctgacatcaacctgatggcctttctgcaacaggatgcgttgcacttaagc
gatctgttccgtcattccgcgcagcaaatgggcgttacggcaggcctgacgctacccatt
ttcgatagtggtcgtcttaacgccaatctcgatatcgcaaaagccgaaagcaacttgtct
atcgccagctacaacaaagcggtggttgaagcggtgaatgacgtggcgcgggcagccagt
caggttcagacactggcggagaaaaaccagcatcaggcgcaaattgagcgcgatgcctta
cgtgtggtaggtcttgcgcaggcccgctttaacgcgggtatcattgccggttcccgcgtc
agcgaagccaggatcccggcgctgcgtgagcgggccaatggcctgttattgcaagggcag
tggctggatgcctccattcaactcactggtgcgttgggcgggggttacaaacgctga
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