Escherichia coli K-12 MDS42: ECMDS42_3518
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Entry
ECMDS42_3518 CDS
T02541
Symbol
fdhF
Name
(GenBank) formate dehydrogenase-H, selenopolypeptide subunit
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok00680
Methane metabolism
ecok00720
Other carbon fixation pathways
ecok01100
Metabolic pathways
ecok01120
Microbial metabolism in diverse environments
ecok01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
ECMDS42_3518 (fdhF)
00680 Methane metabolism
ECMDS42_3518 (fdhF)
Enzymes [BR:
ecok01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
ECMDS42_3518 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
BAL40636
LinkDB
All DBs
Position
complement(3726321..3728468)
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AA seq
715 aa
AA seq
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MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP
RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADS
HPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLY
DKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVT
QFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDP
ANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFE
DLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQ
IISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGT
SYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAA
LADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGA
CNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcgtcacggtttgcccctattgcgcatcaggttgcaaaatcaacctggtc
gtcgataacggcaaaatcgtccgggcggaggcagcgcaggggaaaaccaaccagggtacc
ctgtgtctgaagggttattatggctgggacttcattaacgatacccagatcctgaccccg
cgcctgaaaacccccatgatccgtcgccagcgtggcggcaaactcgaacctgtttcctgg
gatgaggcactgaattacgttgccgagcgcctgagcgccatcaaagagaagtacggtccg
gatgccatccagacgaccggctcctcgcgtggtacgggtaacgaaaccaactatgtaatg
caaaaatttgcgcgcgccgttattggtaccaataacgttgactgctgcgctcgtgtctga
cacggcccatcggttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgct
attaacgaaattgataataccgatttagtgttcgttttcgggtacaacccggcggattcc
cacccaatcgtggcgaatcacgtaattaacgctaaacgtaacggggcgaaaattatcgtc
tgcgatccgcgcaaaattgaaaccgcgcgcattgctgacatgcacattgcactgaaaaac
ggctcgaacatcgcgctgttgaatgcgatgggccatgtcattattgaagaaaatctgtac
gacaaagcgttcgtcgcttcacgtacagaaggctttgaagagtatcgtaaaatcgttgaa
ggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcag
gcggcacggatgtatgcccaggcgaaaagcgccgccatcctgtggggcatgggtgtaacc
cagttctaccagggcgtggaaaccgtgcgttctctgaccagcctcgcgatgctgaccggt
aacctcggtaagccgcatgcgggtgttaacccggttcgtggtcagaacaacgttcagggt
gcctgcgatatgggcgcgctgccggatacgtatccgggataccagtacgtgaaagatccg
gctaaccgcgagaaattcgccaaagcctggggcgtggaaagcctgccagcgcataccggc
tatcgcatcagcgagctgccgcaccgcgcagcgcatggcgaagtgcgtgccgcgtacatt
atgggcgaagatccgctacaaactgacgcggagctgtcggcagtacgtaaagcctttgaa
gatctggaactggttatcgttcaggacatctttatgaccaaaaccgcgtcggcggcggat
gttattttaccgtcaacgtcgtggggcgagcatgaaggcgtgtttactgcggctgaccgt
ggcttccagcgtttcttcaaggcggttgaaccgaaatgggatctgaaaacggactggcaa
atcatcagtgaaatcgccacccgtatgggttatccgatgcactacaacaacacccaggag
atctgggatgagttgcgtcatctgtgcccggatttctacggtgcgacttacgagaaaatg
ggcgaactgggcttcattcagtggccttgccgcgatacttcagatgccgatcaggggact
tcttatctgtttaaagagaagtttgataccccgaacggtctggcgcagttcttcacctgc
gactgggtagcgccaatcgacaaactcaccgacgagtacccgatggtactgtcaacggtg
cgtgaagttggtcactactcttgccgttcgatgaccggtaactgtgcggcactggcggcg
ctggctgatgaacctggctacgcacaaatcaataccgaagacgccaaacgtctgggtatt
gaagatgaggcattggtttgggtgcactcgcgtaaaggcaaaattatcacccgtgcgcag
gtcagcgatcgtccgaacaaaggggcgatttacatgacctaccagtggtggattggtgcc
tgtaacgagctggttaccgaaaacttaagcccgattacgaaaacgccggagtacaaatac
tgcgccgttcgcgtcgagccgatcgccgatcagcgcgccgccgagcagtacgtgattgac
gagtacaacaagttgaaaactcgcctgcgcgaagcggcactggcgtaa
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