Edaphobacter sp. 12200R-103: GWR55_06435
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Entry
GWR55_06435 CDS
T06408
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR55_06435
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_06435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_06435
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_06435
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_06435
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR55_06435
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GWR55_06435
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GWR55_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QHS51420
UniProt:
A0A6B9YPC7
LinkDB
All DBs
Position
complement(1560381..1561856)
Genome browser
AA seq
491 aa
AA seq
DB search
MRDRARSALIALAGSLSFLISGCRVGPEYVRPTAPLAPEFKEALPSNFKASDGWKIAQPS
DAQLKGDWWTLFNDSQLNELEAQVDPANQTLKEAEANFRASRAAVRFYRADLAPTVSANP
GIGAIRNSTNQPYFNKSVASNGTGDFTLPIDLNYEIDLWGRIRRSITQSREQAQASAADL
ETTRLSLHAELAIDYFNLRSADGQRKLLDETVKAFQDALQLTEDRYEGGAAPLSDVTQAR
TQLQTAQVQATDVDIMRAQYEHAIAMLIGKAPAQFTLPRSPVTVAGPAMPEIPGVLPSQL
LERRPDIASAERRMAAANEQIGIAQAAFYPTLSLSAAAGFTGTSALNWFTWPSRFFAVGP
TLSQTLFDHGRRRSVSDIARADYDGTVASYRQTTLTAFQQVEDSLNALHGLEIESGQQQA
ATSSARQSLDLFNTRYEGGVDTYLQVITWQTALLQNERNDIDITRRRLEASVLLIKALGG
GWNTSLLPQQP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagagatcgtgcacgatcagcgctgattgcgttggcggggagtctttcctttctgatt
tccggctgccgcgtcggcccggagtacgttcggcccacagcgccgctggcgccggagttc
aaagaagctctcccgagtaacttcaaggcttcagatggatggaagatcgcgcagcccagc
gatgcccagttgaagggcgactggtggacgctgttcaacgattcacaattgaacgagctt
gaagcccaggtggatcccgcgaaccagaccttgaaagaggcagaggcaaacttccgcgcg
tcgcgcgctgcggttcgattctatcgggccgatcttgctcctaccgtctcggcaaatccg
ggtataggggcgattcggaactcgaccaatcagccgtatttcaacaagtctgttgccagt
aacgggacgggagactttaccctgccgatcgatctgaactacgagattgacttgtgggga
aggattcgtcgcagcattacgcagtcgcgggagcaggcacaggcatcggcagcggatctg
gagacgacgcggctgtcactgcatgcggagcttgcgattgactacttcaatctgcgctcg
gccgatgggcagcggaagctgctggacgagacggtgaaggcttttcaggatgccttgcag
ctgacggaggatcgttatgaaggaggcgcagctccgctgtcggacgtgacgcaggcgagg
acacagctgcagaccgcgcaggtgcaggcgaccgatgtagacatcatgcgcgcacagtat
gagcacgcgatcgcgatgctgattggtaaggctcctgcgcagtttacgctgccgcgcagc
ccggttactgttgccgggccggcgatgccggagattcccggagtccttccttcgcaactg
ctggaacggcggcccgatatcgcttcggctgagcgtcgcatggcggctgccaacgagcag
attggaattgcgcaggctgcgttctatccgacgctttcgctttcggctgctgcaggattt
acaggaacatcggcgctgaattggtttacatggcccagtcgcttctttgcagttggaccg
acgctgtcgcagacgctattcgaccatggacgaagacgctctgtcagcgatattgcccga
gcggactatgacggtacagtggcttcgtacaggcaaacgacactcacggcatttcagcag
gtagaagacagcctgaatgcgttgcatggacttgagattgaatccggccagcaacaggcg
gcgacgtcgtcggcccggcagtcactggatctgtttaatactcgctacgaaggtggggtc
gacacctatctgcaagtgattacgtggcagacggcgctgttgcagaatgagcgcaacgat
atcgatatcacacgccgccgtcttgaggcgagcgttttgctgatcaaggcgcttggtgga
ggatggaatacatcgctgcttccgcaacagccttaa
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