Edaphobacter sp. 12200R-103: GWR55_06455
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Entry
GWR55_06455 CDS
T06408
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda01503
Cationic antimicrobial peptide (CAMP) resistance
eda02020
Two-component system
eda03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GWR55_06455
09132 Signal transduction
02020 Two-component system
GWR55_06455
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_06455
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR55_06455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_06455
02044 Secretion system [BR:
eda02044
]
GWR55_06455
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_06455
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_06455
Secretion system [BR:
eda02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GWR55_06455
RTX toxin transporter
GWR55_06455
Multiple protein transporter
GWR55_06455
RaxAB-RaxC type I secretion system protein
GWR55_06455
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GWR55_06455
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GWR55_06455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QHS51423
UniProt:
A0A6B9YQX8
LinkDB
All DBs
Position
complement(1567360..1568703)
Genome browser
AA seq
447 aa
AA seq
DB search
MELYSSSRRKPVNRFRTVVVTGVLLSGAGASGWGQGTGGTPAPVKLTVADAEAIAIKNHP
QISTAKLLALAEGEVTRQAKAAELPTVTGSLTAVDAHDGGRLTAGVLNNPVLYTRAAGGV
SVSQLITDFGRTRNLVSSAALNARAQQSSELATEADIKLAVDQAFYRALAAQSVVNVAKK
TVSFRQDTANLVGSLANAKLKSTLDESFAEVNLNQAQVLLLDAQNEEDAAFADLSNVLGY
ERQQNFQLVDRMGQSKAPVQDIDSLTMLAFQSRPDLAALNEQQQAAEKYRKAEHELWRPT
ISALADAGGAPVRSDAITSNWYGAAGVNINIPVFNGGLYSARAKEADYRASAAQEQVRAL
RNTIARDVRVSWLAAQSAYQKIGVTAKLLNQANQALDLAQTRYKLGLSSIVELSQAQLAQ
TSAEIGNTNARYDYQRSLAAIRYQTGQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagctttacagcagcagcaggaggaagcccgtgaacaggtttagaacggttgttgtt
acgggagttcttctgtcgggtgcaggcgcttcgggctggggacagggtaccggtggtact
cctgctcccgtgaagctgacggtggccgatgccgaagcgattgcaatcaagaatcatccg
cagatttctacagcgaagctactggcgctggccgaaggagaggtaacgcggcaggcaaag
gcagcggagcttcctacagtaaccggcagcctgactgcggtcgacgcgcacgatggcggg
cggcttacggcaggcgtgctgaacaatccggttctgtatacgagagcggcggggggagtc
tccgtgagccaattgatcacggatttcggccgtacacgaaatctggtgagcagtgcggca
ctgaatgcacgggcccagcagtcgagcgagcttgcgaccgaggcggatatcaagctggct
gtcgatcaggcgttttatcgcgcgctggccgcccaatcggtcgtgaacgtagcgaagaag
acagtgtcgtttcgacaggatacggcgaacctggttggctctttggcgaatgcgaagttg
aaatcgacgctggatgaaagctttgccgaggtaaatctgaaccaggcccaggtgcttctg
ctcgacgcgcagaatgaagaggatgcggcgttcgcagatttgagcaatgtgcttgggtat
gagcgccagcagaattttcagctggtggatcgtatgggccaatcgaaggctcctgtgcag
gatatcgattcgctgacgatgctggccttccaatcgcggcccgatcttgctgctttaaat
gagcagcaacaggcggcggagaaatatcggaaggcggaacacgagctgtggcgtcctacg
atctccgctttggcggatgccggaggagcgccggtgcggtcggatgcgattacatcgaac
tggtatggagcagccggggtgaacattaatattcctgtgttcaatggcggactgtattcg
gcccgggcaaaagaagcggattaccgggccagcgcggcgcaggagcaggttcgtgcgttg
cggaacacgatcgcgcgagatgtcagggtgtcttggctggctgcgcaatcggcgtaccag
aagattggcgtgacggccaagcttctaaatcaggccaatcaggcgctcgatctggcgcag
acacggtacaagctggggctgagcagtattgtcgagttgagccaggcgcagctggcccag
acatcggcagagatcggcaacacgaacgcgcgatatgactaccagcggtcgctggctgcg
attcgttaccagacggggcagtag
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