Edaphobacter sp. 12200R-103: GWR55_07615
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Entry
GWR55_07615 CDS
T06408
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR55_07615
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_07615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_07615
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_07615
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_07615
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR55_07615
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GWR55_07615
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GWR55_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Prok-E2_C
Motif
Other DBs
NCBI-ProteinID:
QHS51625
UniProt:
A0A6B9YQS8
LinkDB
All DBs
Position
complement(1836305..1837744)
Genome browser
AA seq
479 aa
AA seq
DB search
MRAGSIKMLAALLGVAALSGCKVGPNYKVPAMPAPPAYSDNGHNGAWTTAKPADTANRGD
WWAIYGDTELNDLEQRCATANQSIAAALQAYQQSHDLVREARSSLYPTIAIGASASRNRI
SSTRPLRPSNAAQDYWDFLIPLNISWEPDLWGRVRRQIESNSALAQATAADLANTQLSLQ
GLLAVSFFQLRGIDLQAQLLQSTLNAYQQTLKLTQDRFRGGLSAESDVEQARAQLEQARA
QLIDLGVGRAQLEHAIAVLVGAPATGFHIAEKPLTGDPPSVPTGIPSEVLQRRPDIAAAE
RRVAAANAVIGVAKAAYFPTIILGANGTLESSQITNLFNQGSAGWNAGPSASELLFDAGR
RRAQVDYAVAQREQATALYRDQVLSAFRDVEDQLSALRVLEQEASVQAAAVAAAKRSTEL
STLRYKRGLAPYLEVLTNQTIELTNERTAAALVTQRILASTRLQIALGGGWNTTELPQN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaggcagcataaaaatgctggccgccctgttgggggtggccgccctatcgggc
tgcaaggtggggccgaactataaggttccggcgatgcctgcgcctccggcctatagcgac
aatggccataacggtgcatggacgacggcgaagcctgccgacaccgcaaatcgtggtgac
tggtgggcgatctacggagatactgagctcaatgacctggaacagcgctgtgcgacggcg
aaccagagtatcgcggctgcgctgcaggcctaccagcagtcgcacgacctggttcgagag
gcccggtcctcgctctacccgacgattgcaatcggtgcctcggcgagtcggaatcgtatc
tcgagcacccggccgctgaggccatcgaatgcggcacaggactactgggattttctgatt
cctctgaacatctcgtgggagccggacctgtggggccgtgtccggaggcagatcgagtcc
aacagcgcgctggcgcaggctacggcggcggacctggccaatacacaactcagtctgcag
ggcttgttggctgtcagcttctttcagctgcgcggcatcgatctgcaggcccagctgctt
cagagcacattgaatgcctatcagcaaaccctgaaactgacgcaggaccgctttcgtgga
gggttgagcgcggaaagcgatgtggaacaggccagggcacaactggaacaggcacgggct
caactgattgatttgggcgtggggcgggcacaactggaacatgcgatcgccgtgctcgta
ggagcgcctgcgacaggttttcatatcgctgagaagccgctcaccggagatcccccgagc
gtcccgacgggaataccgtcggaggtgctgcagcgcagaccggatattgccgcagccgaa
aggcgagtggcagcagctaatgccgtgatcggtgtggccaaggccgcctactttcccacg
attatcctcggggcaaacggaaccctggaaagcagccagatcacgaacctgttcaatcag
ggaagtgcggggtggaatgccgggccgagtgcaagtgaactgctgtttgacgctggcagg
cggcgagcccaggtggattacgccgtggcccagagggagcaggcaacggcgctttatcgc
gaccaggttctctccgcgtttcgcgatgtagaagatcagctctccgcgcttcgcgtatta
gagcaggaggcgtcggtgcaggccgctgccgttgctgctgcgaaacggagtacggagctt
tcgaccctgcgttacaagcgggggctggcgccctatctcgaggtcctgacgaaccagacg
attgagctgacgaacgagcgaacggcggccgctctggtgacccagcggattcttgcgagc
actcgacttcagattgcattgggtgggggatggaacacgacagagctgcctcagaattag
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