Enterococcus faecalis OG1RF: OG1RF_10459
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Entry
OG1RF_10459 CDS
T01882
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
efi
Enterococcus faecalis OG1RF
Pathway
efi03030
DNA replication
efi03410
Base excision repair
efi03420
Nucleotide excision repair
efi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG1RF_10459 (ligA)
03410 Base excision repair
OG1RF_10459 (ligA)
03420 Nucleotide excision repair
OG1RF_10459 (ligA)
03430 Mismatch repair
OG1RF_10459 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efi03032
]
OG1RF_10459 (ligA)
03400 DNA repair and recombination proteins [BR:
efi03400
]
OG1RF_10459 (ligA)
Enzymes [BR:
efi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OG1RF_10459 (ligA)
DNA replication proteins [BR:
efi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OG1RF_10459 (ligA)
DNA repair and recombination proteins [BR:
efi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OG1RF_10459 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OG1RF_10459 (ligA)
MMR (mismatch excision repair)
DNA ligase
OG1RF_10459 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OG1RF_10459 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AEA93146
LinkDB
All DBs
Position
478041..480071
Genome browser
AA seq
676 aa
AA seq
DB search
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI
TPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELK
IDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPISVEVRGECYMPK
QSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDE
LGFTVKAPRWAIAYKFPPEEAETVVEDIEWTIGRTGVVTPTAVMAPVRVAGTTVSRASLH
NADFIQMKDIRLNDHVIIYKAGDIIPEVAQVLVEKRAADSQPYEMPTHCPICHSELVHLD
EEVALRCINPKCPAQIKEGLNHFVSRNAMNIDGLGPRVLAQMYDKGLVKDVADLYFLTEE
QLMTLDKIKEKSANNIYTAIQGSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLPTLSR
ATAEEIVALDSIGETIADSVVTYFENEEVHELMAELEKAQVNLTYKGLRTEQLAEVESPF
KDKTVVLTGKLTQYTREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAESLGVT
VWNEQEMVDALDASHF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaaccattaacattaacggcggcgacaactcgtgcgcaagaattaagaaaa
caactcaatcaatattcccatgaatattatgtcaaagatcaaccatccgtagaagattat
gtttacgatcgtttgtataaagagttagtcgatattgaaacggagtttcctgatttaatc
acgccagattcgccgacacaacgtgtaggtggtaaagttttatctggttttgaaaaagct
ccgcatgacattccaatgtatagtttaaatgatgggtttagcaaggaagacatttttgct
tttgatgaacgtgttcgtaaggcgattggtaaacccgttgcttactgttgcgagttgaaa
attgacgggttagcaatttcattacgttatgaaaacggggtgtttgtacgcggagcaaca
cgaggcgatggaacggttggtgaaaacattacagagaacttacgaacggttcgctctgta
ccgatgcgtttaacggagcccatttcagtggaagttcgtggcgagtgctacatgcctaaa
caatcctttgtcgcattgaatgaagaacgtgaagaaaatggccaagatatttttgccaat
cctcggaatgcagcggcgggaagcttgcgccaactagatacaaaaattgtggcgaaacgg
aacttaaatacgtttttatacacagttgctgactttgggccaatgaaagcgaagacgcag
tttgaggcattagaagagctttctgcaattggttttagaaccaatcccgaacggcaatta
tgtcagtcaattgatgaagtctgggcctacattgaagaataccatgaaaagcggagcact
ttgccatacgaaatcgatggaattgtgattaaagtgaacgaatttgcgttgcaagatgaa
ttaggtttcactgtcaaagcacctcgctgggcgattgcctacaaatttccaccagaagaa
gcagaaacagtagtggaagatattgaatggacaattgggcgcacgggggtggtcactcct
actgcagtcatggctcctgtacgagtcgcgggaaccacggttagtcgggcaagtttgcat
aatgcagattttattcaaatgaaagatatccgtttaaatgatcatgttattatttacaaa
gccggcgatattatcccagaagtagcgcaagtcctagttgaaaaacgtgcagccgatagt
cagccttatgaaatgccgacacattgtccaatttgtcatagtgagttggtgcatttagat
gaggaagtggcgttacgttgtattaatccaaaatgccctgcgcaaattaaagaagggctg
aatcactttgtctcacgaaacgcaatgaacattgatggcttggggccacgagtgttagca
caaatgtatgacaaaggattagtgaaagacgtagcggatctgtatttcttaacagaagaa
caattaatgactttggataaaatcaaagaaaaatcagcaaacaacatttatactgccatt
caagggagtaaagaaaactctgtcgaacgtttgatttttggcttagggattcgccatgtg
ggtgcgaaagcggcgaaaattttagcggagcattttggtgatttaccaaccttaagtcgt
gcaactgcggaagaaattgtggctttggattcaattggcgaaacaatcgcagacagcgtt
gtgacgtattttgaaaatgaggaagttcatgaattaatggctgaactggaaaaagcccaa
gtgaacttgacatataaaggtctccggacagaacaattagcagaagtggagtcacctttc
aaagacaaaacagttgttttaacaggaaaattaacgcagtacactcgcgaagaagccaaa
gaaaaaattgaaaatcttggtggaaaagttacagggagtgtttcgaaaaaaactgacatt
gtggttgctggcgaagatgcaggcagtaaattaaccaaagctgaaagcttaggcgtgacc
gtttggaatgaacaagaaatggtcgatgcgttagatgcaagtcatttttaa
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