Elizabethkingia ursingii: BBD34_16420
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Entry
BBD34_16420 CDS
T05036
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ego
Elizabethkingia ursingii
Pathway
ego01501
beta-Lactam resistance
ego02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBD34_16420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BBD34_16420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ego02000
]
BBD34_16420
01504 Antimicrobial resistance genes [BR:
ego01504
]
BBD34_16420
Transporters [BR:
ego02000
]
Other transporters
Pores ion channels [TC:
1
]
BBD34_16420
Antimicrobial resistance genes [BR:
ego01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BBD34_16420
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BBD34_16420
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BBD34_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CdvA
SpoIIID
Fez1
Motif
Other DBs
NCBI-ProteinID:
AQX10117
UniProt:
A0AAJ3TPC1
LinkDB
All DBs
Position
3613914..3615362
Genome browser
AA seq
482 aa
AA seq
DB search
MENLKTKSIISAIAVSLVLASCKAPMVTVVKDEVKNNLPQNFIQKETEDSGNNSGTTPWR
QFFTDPNLVSLIETALKNNQDLLITFQQIEIAKSGVLAKKGMLNPTVSAGVNAGLKKAGR
YTSEGAGDATTDIEPGRKMPDPLGNFAGGITASWEVDIWKKLRTEKESAIAHYLSTVEGK
NFVLSSLIEEVADSYYELLALDNQLDITREYIKLQERALEISKIQKQASATTELAVKKFE
AELAKSRASEYTIRQDITEKENEINALLGRYPQAIVRTKESFMSTIPQTVYTGIPSQLLA
NRPDIKQAELELKAAKLDVQAARKEFYPSLNISAALGLEAFKPSYLVKMPESIAYNLVGE
LAGPLINKSAIKANFQATDARQIQALYEYDKTILNAYLDVANLMSKVKNIDEFYKLKSQE
NHALEEATGIANQLFKNSRADYLEVLLNQRDALDAKLELIDAKQQQLSTVVDIYKSLGGG
WK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgaagactaaaagtattattagtgccattgctgtatcgttggttttagca
agctgtaaagcaccaatggtaacagtagtaaaagatgaggtgaaaaataacctgcctcag
aatttcattcaaaaagaaacagaagactctggtaacaatagcggtacaactccatggaga
cagttctttactgatccgaatctagtgagtcttattgagactgcattaaagaataatcag
gatctattaattacatttcagcagatcgaaattgctaaaagcggtgtattggctaaaaaa
ggaatgctaaatccgacagtctctgcaggtgtaaatgcgggactgaaaaaagcaggacgt
tatacgagcgaaggcgcaggtgatgccacaacagatatagaaccgggaagaaaaatgccg
gatccgctggggaactttgcaggtggtattacggcaagttgggaagtcgatatctggaag
aagctgagaacagaaaaagaatctgcaattgcgcattatctttctacagtggaggggaag
aactttgttctttccagccttatagaagaagtagcagatagctattacgaattactggcg
ctggataatcagttagatattaccagagaatatattaagcttcaggagcgggctttggag
atttcaaaaattcagaaacaggcatccgcaacaaccgaactggctgtaaagaagtttgaa
gcagagttagcaaaatccagagcttcggaatatacaatccgtcaggatataactgagaaa
gaaaatgagataaatgcacttttaggaaggtatccgcaagctattgtgagaacgaaagag
agctttatgtcaactattcctcagacggtatataccggaattccttcgcagctactggca
aaccgtccggacattaagcaggctgaattagaattaaaggctgcaaagctagatgtgcag
gctgcccgaaaagagttttatccttcactgaatatttcagcagcattaggtttggaagcc
ttcaaaccatcttatttagtgaaaatgcctgaatctattgcctataacctggtaggagag
ctggcagggccgcttatcaataaaagtgctattaaggcaaatttccaggcaacagacgca
agacaaattcaggcattgtatgaatacgataaaactattctaaatgcttatttggatgtt
gctaatctaatgtctaaggttaagaatattgatgagttttataaacttaaatctcaggaa
aatcatgcattagaagaagctacgggaattgcaaatcagttatttaaaaactcacgtgca
gattatctggaggttttactcaaccagagagatgcattggatgccaagctggaactaatc
gatgcaaaacaacagcaattaagtacagttgtagatatctacaaaagcttaggcggaggt
tggaaataa
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