Escherichia coli LF82: LF82_0629
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Entry
LF82_0629 CDS
T00854
Symbol
fdhF
Name
(GenBank) formate dehydrogenase-H, selenopolypeptide subunit
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
elf
Escherichia coli LF82
Pathway
elf00680
Methane metabolism
elf00720
Other carbon fixation pathways
elf01100
Metabolic pathways
elf01120
Microbial metabolism in diverse environments
elf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
LF82_0629 (fdhF)
00680 Methane metabolism
LF82_0629 (fdhF)
Enzymes [BR:
elf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
LF82_0629 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
LF82_0629 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
CAP78552
LinkDB
All DBs
Position
complement(4391643..4393790)
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AA seq
715 aa
AA seq
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MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP
RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADS
HPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLY
DKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAESAAILWGMGVT
QFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDP
ANREKFAKAWGVESLPAHTGYRISELPHRVAHGEVRAAYIMGEDPLQTDAELSAVRKAFE
DLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQ
IISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGT
SYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAA
LADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGA
CNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcgtcacggtttgcccctattgcgcatcaggttgcaaaatcaacctggtc
gtcgataacggcaaaatcgtccgggcggaggcagcgcaggggaaaaccaaccagggtacc
ctgtgtctgaagggttattatggctgggacttcattaacgatacccagatcctgaccccg
cgcctgaaaacccccatgatccgtcgccagcgtggcggcaaactcgaacctgtttcctgg
gatgaggcactgaattacgttgccgagcgcctgagcgccatcaaagagaagtacggtccg
gatgccatccagacgaccggctcctcgcgcggtacgggtaacgaaaccaactatgtaatg
caaaaatttgcgcgcgccgttattggtaccaataacgttgactgctgcgctcgtgtctga
cacggcccatcggttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgct
attaacgaaattgataataccgatttagtgttcgttttcgggtataacccggcggattcc
cacccaatcgtggcgaatcacgtaattaacgctaaacgtaacggggcgaaaattatcgtc
tgcgatccgcgtaaaattgaaaccgcgcgcattgctgacatgcacattgcattgaaaaac
ggctcgaacatcgcgctgttgaatgcgatgggccatgtcattattgaagaaaatctgtac
gacaaagcgttcgtcgcttcccgtacagaaggctttgaagagtatcgtaaaatcgttgaa
ggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcag
gcggcgcggatgtatgcccaggcagaaagcgccgccatcctgtggggcatgggggtaacc
cagttctatcagggcgtggaaaccgtgcgttctctgaccagcctcgcgatgctgaccggt
aacctcggtaagccacatgcgggtgtaaacccggttcgtggtcagaacaacgtgcagggt
gcctgcgatatgggcgcgctgccggatacgtatccgggctatcagtacgtgaaagatccg
gctaaccgcgagaaattcgccaaagcctggggcgtggaaagcctgcctgctcataccggc
tatcgcatcagcgagctgccgcaccgcgtggcgcatggtgaagtgagagcggcgtacatt
atgggcgaagatccgctgcaaactgacgcggaactgtcggcagtacgtaaagcctttgaa
gatctggaactggttatcgttcaggacatctttatgaccaaaaccgcgtcggcggcggat
gtcattttaccgtcaacgtcgtggggcgagcatgaaggcgtgtttactgcggctgaccgt
ggcttccagcgtttcttcaaggcggttgagccgaagtgggatctgaaaacggactggcaa
atcatcagtgaaattgccactcgtatgggttatccgatgcactacaacaacacccaggag
atctgggatgagttgcgtcatctgtgcccggatttctacggtgcgacttacgagaaaatg
ggcgaattgggcttcattcagtggccttgccgcgatacttcagatgccgatcaggggact
tcttatctgtttaaagagaagtttgataccccgaacggtctggcgcagttcttcacctgc
gactgggtagcgccaatcgacaaactcaccgacgagtacccgatggtactgtcaacggtg
cgtgaagttggtcactactcttgccgttcgatgaccggtaactgtgcggcactggcggcg
ctggctgatgaacctggctacgcacaaatcaataccgaagacgccaaacgtctgggtatt
gaagatgaggcattggtttgggtgcactcgcgtaaaggcaaaattatcacccgtgcgcag
gtcagcgatcgtccgaacaaaggggcgatttacatgacctaccagtggtggattggtgcc
tgtaacgagctggtgaccgaaaacttaagcccgattacgaaaacgccggaatacaaatac
tgcgccgtgcgcgtcgagccgatcgccgatcagcgcgccgccgagcagtacgtgattgac
gagtacaacaagttgaaaactcgcctgcgcgaagcggcactggcgtaa
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