Escherichia marmotae: C1192_20325
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Entry
C1192_20325 CDS
T05353
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
ema
Escherichia marmotae
Pathway
ema01501
beta-Lactam resistance
ema01503
Cationic antimicrobial peptide (CAMP) resistance
ema02020
Two-component system
ema03070
Bacterial secretion system
Module
ema_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C1192_20325
09132 Signal transduction
02020 Two-component system
C1192_20325
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C1192_20325
01503 Cationic antimicrobial peptide (CAMP) resistance
C1192_20325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ema02000
]
C1192_20325
02044 Secretion system [BR:
ema02044
]
C1192_20325
01504 Antimicrobial resistance genes [BR:
ema01504
]
C1192_20325
Transporters [BR:
ema02000
]
Other transporters
Pores ion channels [TC:
1
]
C1192_20325
Secretion system [BR:
ema02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C1192_20325
RTX toxin transporter
C1192_20325
Multiple protein transporter
C1192_20325
RaxAB-RaxC type I secretion system protein
C1192_20325
Antimicrobial resistance genes [BR:
ema01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
C1192_20325
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
C1192_20325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AUT29193
UniProt:
A0A2B7M4G6
LinkDB
All DBs
Position
complement(3975597..3977078)
Genome browser
AA seq
493 aa
AA seq
DB search
MKKLLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY
QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNTLLKEAEK
RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGATAGQYDDSN
MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI
SSINAYKQAVISAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL
NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPAVQQVSA
RTSTSNGHNPFRN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccattcttatcggcctgagcctttctgggttcagtacgttgagc
caggccgagaacctgatgcaagtttatcagcaagcacgccttagtaacccggaattgcgt
aagtctgccgccgatcgtgatgctgcctttgaaaaaattaatgaagcgcgcagtccatta
ctgccacagttgggtttaggtgcagattacacctacagcaacggctatcgcgacgcgaac
ggcatcaactctaacgcgaccagtgcgtccctgcagttgacccagtccattttcgatatg
tcgaaatggcgtgcgctgaccttgcaggaaaaagcggccggaattcaggacgtcacttac
cagaccgatcaacaaactctgatcctcaacaccgcgaccgcttatttcaacgtgttgaat
gcgattgacgttctttcctatacccaggcgcaaaaagaagcgatctaccgtcagttagat
caaaccacccaacgttttaacgtgggtctggtggcgatcaccgacgtgcagaacgcccgc
gcacagtacgataccgtgctggcaaacgaagtgaccgcacgtaacaatctcgacaatgcc
gttgagcaactgcgtcagatcactggtaattactacccggaactggcggcgctgaatgtt
gaaaactttaaaaccgacaaaccacagccggtgaacactctgctgaaagaagctgaaaag
cgtaacctgtcgctgttacaggcacgtttgagccaggacctggcacgcgagcaaattcgc
caggcgcaggatggtcacttaccgactctggatttaacggcctctaccggaatttctgac
acctcctacagtggttcgaaaacccgtggtgcgaccgcaggccagtatgacgacagcaat
atgggccagaacaaagtgggcctgagcttctcgctgccgatttatcagggcggaatggtt
aactcgcaggtgaaacaggcgcagtacaacttcgtgggtgccagcgagcaactggaaagc
gcacaccgtagcgtcgtgcaaaccgtgcgttcctccttcaacaacattaatgcatctatc
agtagcattaacgcttacaaacaagccgttatttccgcccaaagctcattagacgcgatg
gaagctggttactcggtcggtacgcgtaccattgttgatgtattggacgccaccacgacg
ctgtacaacgccaagcaagaactggcgaatgcacgttataactacctgattaaccagttg
aatattaaatcagctctgggtacgttgaacgagcaggatctgctggcattgaacaatgcg
ctgagcaaaccggtttccactaacccggaaaacgtcgcgccgcaaacgccggaacaaaat
gctatcgctgatggttatgcacctgatagcccggcaccagccgttcagcaggtatccgca
cgcacttccaccagtaacggtcataaccctttccgtaactga
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