Erwinia rhapontici: LJN55_03205
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Entry
LJN55_03205 CDS
T08392
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
erp
Erwinia rhapontici
Pathway
erp01501
beta-Lactam resistance
erp01503
Cationic antimicrobial peptide (CAMP) resistance
erp02020
Two-component system
erp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LJN55_03205 (tolC)
09132 Signal transduction
02020 Two-component system
LJN55_03205 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJN55_03205 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
LJN55_03205 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_03205 (tolC)
02044 Secretion system [BR:
erp02044
]
LJN55_03205 (tolC)
01504 Antimicrobial resistance genes [BR:
erp01504
]
LJN55_03205 (tolC)
Transporters [BR:
erp02000
]
Other transporters
Pores ion channels [TC:
1
]
LJN55_03205 (tolC)
Secretion system [BR:
erp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LJN55_03205 (tolC)
RTX toxin transporter
LJN55_03205 (tolC)
Multiple protein transporter
LJN55_03205 (tolC)
RaxAB-RaxC type I secretion system protein
LJN55_03205 (tolC)
Antimicrobial resistance genes [BR:
erp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LJN55_03205 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LJN55_03205 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribosomal_S5_C
DisA-linker
Motif
Other DBs
NCBI-ProteinID:
UDQ80884
LinkDB
All DBs
Position
complement(704967..706433)
Genome browser
AA seq
488 aa
AA seq
DB search
MNKLLPLLIGLSLGGFSVASQAENLLQVYQQARLSNPDLRSSAADRDAAFEKINESRSPL
LPQLGLGADYTYNSGYRDARDTNSTTKSASLQLTQTIFDMSKWRALTLQEKTAGIQDVTY
QTAQQTLILNTATAYFNVLNAIDTLSYTEAQKQSIYRELDQTTQRFNVGLVAITDVQNAR
SQYDSVLASEVSARNDLDNAVETLRQVTGNYYPSLASLNVDAFKTEKPQPVNALLKEAES
RNLSLLSARLSQDLAREQIRSSETGHMPTLDLTASTGLSNNRYGGDRSSPNNTDNITGSN
QVGLSFNLPLYSGGAVSSQVKQAQYAFVAASEQLESAHRSAIQTVRSSFNNVNASISSIN
AYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLANARYSYMINQLNIKS
ALGTLNEQDLQTLNNHLGKDVGTSPEIVAPENAQQAANADSAEPRSASKATPVSNKSATR
GNSNPFSQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactgctccctttactcatcggtctgagcctgggcggcttcagtgttgccagc
caggctgaaaacctgctgcaggtatatcagcaggcacgtttatcaaatcctgaccttcgt
agctctgccgccgatcgtgatgctgcctttgagaaaattaacgaatcccgcagcccactg
ctaccacagttaggcctgggcgctgactatacctataacagcggctaccgtgatgccaga
gataccaatagcaccaccaaaagcgcgtcgttacagctgactcagaccatttttgacatg
tcaaaatggcgtgcactgacgctgcaggaaaaaacggcaggcatccaggatgtcacttat
cagacggcacaacagaccctgattctgaacaccgcaaccgcctatttcaatgtgctgaac
gcgatcgacacattgtcgtataccgaagcccagaagcaatctatttaccgtgaactggat
cagaccactcagcgttttaacgtgggtctggtcgccatcactgatgtgcagaacgcacgc
tcccagtacgacagcgtactggccagcgaagtttccgcgcgtaacgacctcgataacgcg
gtagaaacactgcgtcaggtgaccggcaattactatccaagcctggcatcgctgaacgtc
gatgcgtttaaaacggaaaaacctcagccagtgaatgccctgctgaaggaagcggaaagc
cgcaacctgtcgctgctttctgcacgcctgtctcaggacctggcgcgtgagcagattcgt
tcatcagaaaccggccatatgcctacgttggatctgacggcctcaaccggtttatccaac
aaccgttatggcggcgaccgttccagtcccaataacactgacaacatcacaggcagtaac
caggtaggtctgagcttcaacctgccactgtacagcggcggtgccgttagttcccaggtg
aaacaggcgcaatatgcgtttgttgccgccagtgagcagttggaaagcgcacaccgttcc
gccatccagaccgtgcgttcctcgtttaacaacgtgaacgcctcgatcagcagcattaac
gcttacaagcaggcggttgtctctgcacagagctcgctggatgcgatggaagccggttac
tccgtgggtacccgtactatcgttgacgtgctggatgccaccaccacgctgtataacgct
aagcagcagctggcgaatgcccgttacagctacatgattaaccagctcaatattaaatct
gcgctgggtacgctgaacgagcaggatctgcaaacgctgaacaatcatctgggcaaagat
gtcggcacctcgccagaaatcgtcgccccggaaaatgcacagcaagctgccaacgcggac
agtgctgaaccccgttcagccagcaaagcgacgccagttagcaacaaatcggccacccgt
ggcaacagtaatccattcagtcagtaa
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