Erwinia rhapontici: LJN55_18450
Help
Entry
LJN55_18450 CDS
T08392
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
erp
Erwinia rhapontici
Pathway
erp01501
beta-Lactam resistance
erp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJN55_18450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJN55_18450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_18450
01504 Antimicrobial resistance genes [BR:
erp01504
]
LJN55_18450
Transporters [BR:
erp02000
]
Other transporters
Pores ion channels [TC:
1
]
LJN55_18450
Antimicrobial resistance genes [BR:
erp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LJN55_18450
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LJN55_18450
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LJN55_18450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
APG6_N
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
UDQ79407
LinkDB
All DBs
Position
complement(3993910..3995301)
Genome browser
AA seq
463 aa
AA seq
DB search
MKKLTPLVLALLIGGCAVGPDYQRPTAPTALQYKEAKGWQQATPQDQLSKGDWWAVYHDS
TLDSLLRQVKISNQNVAQYEALYRQALALASESRSDLLPTVTGTDSSTRSGASATTSTSG
QSVSNSHALQASASWELDLWGKLRRTLEENRASAEASAAELANITLSAQSTLAQDYFQLR
ILDQRIALYQKSVDAYQRYLTVIQNKYQAGSESRGTLAQAETQLESARASALDLSWQRAQ
LEHAIAVLLGKTPAEFSLAVAPLQATLPAAPVTLPADLLQRRPDIAQAERTVAAANAAVG
VAIAGYYPDLTLSASAGYSGSSFSHLLTLPNRVWSLGPSLSGTLLDFGATSAKVDQARAA
YDADVASYRQTVLSGFEEVENYLVALRTFEAEMQAQQRAAASAQESARVTNNQYQAGMID
YLDVATTENTSLTQQQSLLTLQSTQWVTSVQLIVATGGGWKTP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcactcctcttgtactggcattgctgattggcggatgtgccgttggcccg
gattaccagcgcccgacagccccgaccgcgttgcagtataaagaggccaaaggctggcag
caggccacgccgcaggatcagctcagcaaaggcgactggtgggcggtgtatcacgacagc
acgctggatagcctgctgcgtcaggtgaagatttcgaatcagaacgtggcgcagtatgaa
gccctgtaccgccaggcgctggcgctggcctcagaatcgcgcagcgatctgctgccaacg
gtcaccgggacggacagttcgacgcgcagcggggcatctgccaccaccagcaccagcggt
cagtcggtcagtaacagccacgcattgcaagcctccgcgtcctgggagctggatctctgg
ggcaaactgcgtcgcacgctggaggagaaccgggccagcgcagaggccagcgcggccgaa
ctggcgaatattaccctcagcgcacagtcaacactggcacaggactatttccagctgcgc
attcttgaccagcgcatcgcgctgtatcagaaaagcgtggatgcctatcagcgctacctg
acggttatccagaataaataccaggcaggcagtgaatcacgcggcaccctggcgcaggcg
gaaacccagcttgaaagcgcacgggcttcggcgctggatctcagctggcaacgtgctcag
cttgaacatgcgattgcggtactgctggggaaaaccccggcagagttcagcctcgcagtg
gcaccacttcaggccacactgccggcggcgccagtgacattgccggcagatttactgcaa
cgtcgcccggatatcgcccaggcagaacgcacggtggccgccgccaatgccgccgtgggc
gtggcgattgccggttactacccggatctgacgctcagcgccagcgcgggctattccggc
tccagcttcagtcatctgctgaccttacccaatcgcgtctggtcgctgggacccagcctg
agcggtacgctgcttgatttcggtgccacctccgcgaaagtggatcaggcacgcgccgcg
tacgatgcggatgtggccagctatcggcagaccgtgttgtccggctttgaagaggtcgaa
aactatctggtggcactgcgcaccttcgaagcggaaatgcaggcgcagcagcgtgcggcg
gcctcagcacaggagtccgcacgcgtcactaacaatcagtatcaggccggaatgatcgac
tatctcgacgtggccaccaccgagaataccagcctgacccagcagcagagcctgctgaca
ctgcaaagcacccagtgggtgaccagcgtgcagctgattgtagcaaccggtggcggctgg
aaaacgccgtag
DBGET
integrated database retrieval system
