Ficedula albicollis (collared flycatcher): 101814507
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Entry
101814507 CDS
T02815
Symbol
RIMKLB
Name
(RefSeq) ribosomal modification protein rimK like family member B
KO
K18310
beta-citrylglutamate/N-acetylaspartylglutamate synthase [EC:
6.3.1.17
6.3.2.41
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00250
Alanine, aspartate and glutamate metabolism
fab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
101814507 (RIMKLB)
Enzymes [BR:
fab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.17 beta-citrylglutamate synthase
101814507 (RIMKLB)
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.41 N-acetylaspartylglutamate synthase
101814507 (RIMKLB)
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Gene cluster
GFIT
Motif
Pfam:
RimK
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Synapsin_C
ATP-grasp
Dala_Dala_lig_C
Rimk_N
TopBP1_BRCT0
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
101814507
NCBI-ProteinID:
XP_005038323
UniProt:
U3JXT2
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Position
1:complement(91185397..91227221)
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AA seq
386 aa
AA seq
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MCSSVAPRLWFLTDRRIREDYPQQEILRALKAKCCEEELDFRALVMDEVVLTIEDGNLGL
RVKGELITAYPQVVVVRVPTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQ
ELAGHGVPLPDTFSYGGHENFSKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADL
SHLIRHDAPYLFQKYVKESHGKDVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCS
LSEQGKQLAVQVSNILGMDVCGIDLLMKDDGSFYVCEANANVGFIAFDKACNLDVAGIIA
DYAASLLAPGRLTRRMSLLSVVSTASETSEPELGPPAGAAVDNMSASSSSVDSDPETTER
ELLTKLPGALFNMNQLLANEIKLLVE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagttcagttgctcccagactgtggttcttgacagaccgtcgcatcagagaagat
taccctcagcaggagatcctgcgagccctgaaggccaagtgctgtgaagaggagctggat
ttccgggccttggtgatggatgaagtggtgctgaccatcgaggatggaaatcttggtctc
cgggtgaaaggggagctcattactgcttacccacaagtggtggttgtgcgtgtgccaaca
ccttgggtccagagtgacagcgacatcacagtccttcgccacctagagaagatgggctgt
cgattgatgaatcgtcctcaagccatcctcaactgtgtcaacaagttctggacatttcaa
gaacttgctggccatggtgtgcctcttccagacactttttcatatggtggtcatgagaat
ttttccaaaatgattgatgaggcggaagtgctggagttccctatggtggtgaagaacacg
cggggtcatcgaggtaaagccgtgttcctggcacgagacaagcaccatttggcagaccta
agccatttgatccgtcacgatgccccttacttatttcaaaaatacgttaaggagtcccac
ggcaaggatgtgcgcgtcatcgtagtgggaggccgtgtggtgggcaccatgctccgctgc
tcgacagatgggaggatgcagagtaactgctcgcttggtggcgtaggaatgatgtgctcg
ctgagcgaacaaggcaagcagttggcagtccaagtgtcaaacatcctggggatggatgtg
tgcggcattgacctgctgatgaaggacgacggctcattctacgtctgcgaggccaatgca
aatgtaggtttcattgcctttgacaaggcttgtaatttagacgtagctggtatcatagcg
gactatgccgcttccctgctggcccccggccgcttgacgcggcgcatgtccctgctctcc
gtggtgtccacggccagcgagactagcgagccagagctgggccctccagctggggccgct
gtcgacaacatgagtgctagctccagctctgtcgacagcgaccctgagaccacggagaga
gagttgctcaccaagctcccgggggctctcttcaacatgaaccagctattagccaatgag
atcaagctccttgtggagtga
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