Flavobacterium channae: LOS89_08385
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Entry
LOS89_08385 CDS
T08502
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fcb
Flavobacterium channae
Pathway
fcb01501
beta-Lactam resistance
fcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOS89_08385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOS89_08385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcb02000
]
LOS89_08385
01504 Antimicrobial resistance genes [BR:
fcb01504
]
LOS89_08385
Transporters [BR:
fcb02000
]
Other transporters
Pores ion channels [TC:
1
]
LOS89_08385
Antimicrobial resistance genes [BR:
fcb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOS89_08385
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LOS89_08385
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LOS89_08385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Fez1
DUF641
Motif
Other DBs
NCBI-ProteinID:
UGS22795
LinkDB
All DBs
Position
complement(1814993..1816429)
Genome browser
AA seq
478 aa
AA seq
DB search
MKRNNLLKAVVLGCSILILHSCGIPKVATQESNITLPTNYSEKVTQSDNSGKVSWKDFFE
DKYLQSLIDSTLVNNKELNILMQKVNMAQNEIQARKGEYLPSVGLGAGADLDKVGKFTRN
GSVEENLNIREDEKFPEPLTNYKFGLYSTWELDVWKKLRNSKKAAVMEYMASQEGKNYLV
TNLVAEVANSYYELIALDAQLKNLEQNIEIQKNALEIVKLLKESARTTLLAVKRFEAEVQ
KNQSEIYNLKQEIVEVENKINFLVGRTPQPVLRDASNFMATTPKFVNVGLPSDLLENRPD
IKQAQLELEAAKLNIKVAKANFYPQFGLKAGIGYEAFNPKYLLNSPESLLYSIVGDAIMP
LVNRNAIKATYKTASAKQIQAVYEYEQTILRAYTEVINQMSKIENLENSFNLKNNQVEAL
NQSIDIANQLFQSARADYIEVLLTQRDALEAKTDLIETRKNQMLTVINLYKALGGGWN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaataatttattaaaagcagtagtattaggatgttccatcctaatactacat
tcttgtggaattccaaaagtagctacacaagaaagtaatattactttgccaactaattat
tcggaaaaagtaacacaaagtgataattctggaaaagtaagctggaaagatttttttgaa
gataaatatttacaaagcttaatcgattctacattagttaataataaagagttgaatatt
ttgatgcaaaaagtaaatatggctcaaaatgaaattcaagctagaaaaggggagtattta
ccaagcgtaggtttaggagctggtgccgatttagataaagttggtaagtttactagaaat
ggttcagttgaagaaaatttaaacatcagagaagatgaaaaatttcctgagccattaaca
aactacaaatttggtttatacagtacttgggaattagacgtttggaaaaaacttcgtaat
tctaaaaaagctgctgtaatggaatatatggcttctcaagaagggaagaactatttagtt
actaatttagttgcagaggttgctaactcatattacgaattgattgctttagatgcgcaa
ttgaaaaacttagagcaaaatattgaaattcaaaaaaatgctttagaaatcgtaaaatta
ttaaaagagtcagcaagaacaacacttttagcagttaaacgttttgaagctgaagttcaa
aaaaaccaaagtgaaatttacaatctaaaacaggaaattgttgaagtagaaaataaaatc
aactttttagtgggtagaactccacaaccagttttaagagatgcaagcaatttcatggct
acaactccaaaatttgtaaatgtaggtttaccttcagatttattggaaaacagacctgat
atcaaacaagcacaattagaattggaagctgctaaattgaatattaaagttgctaaagct
aatttttatccgcagtttggattaaaagcaggaataggttacgaagcatttaatcctaag
tatttattaaattctccagaatcgttgttgtattctattgttggagatgcaattatgcca
ttagtaaatagaaatgctattaaagcaacgtataaaacagcttcagctaaacaaattcag
gctgtttatgaatacgaacaaacaattttaagagcttatacagaagttattaatcaaatg
tctaagattgaaaatttagagaattcatttaacttgaaaaacaaccaagttgaagcttta
aatcagtctatcgatattgcaaatcaattatttcaatcagcaagagcagattacattgaa
gttttacttactcagcgcgatgctttggaagcaaaaacagatttaatcgaaactcgtaaa
aaccaaatgcttactgtaattaatttatacaaagcgcttggtggtggatggaattaa
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