Flavobacterium columnare: FCOL_04560
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Entry
FCOL_04560 CDS
T01653
Name
(GenBank) putative outer membrane transport/efflux protein
KO
K12340
outer membrane protein
Organism
fco
Flavobacterium columnare
Pathway
fco01501
beta-Lactam resistance
fco01503
Cationic antimicrobial peptide (CAMP) resistance
fco02020
Two-component system
fco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FCOL_04560
09132 Signal transduction
02020 Two-component system
FCOL_04560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FCOL_04560
01503 Cationic antimicrobial peptide (CAMP) resistance
FCOL_04560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fco02000
]
FCOL_04560
02044 Secretion system [BR:
fco02044
]
FCOL_04560
01504 Antimicrobial resistance genes [BR:
fco01504
]
FCOL_04560
Transporters [BR:
fco02000
]
Other transporters
Pores ion channels [TC:
1
]
FCOL_04560
Secretion system [BR:
fco02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FCOL_04560
RTX toxin transporter
FCOL_04560
Multiple protein transporter
FCOL_04560
RaxAB-RaxC type I secretion system protein
FCOL_04560
Antimicrobial resistance genes [BR:
fco01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FCOL_04560
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FCOL_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEW85743
UniProt:
G8X7N0
LinkDB
All DBs
Position
complement(1071173..1072618)
Genome browser
AA seq
481 aa
AA seq
DB search
MEETKTMKKTSHILIFLIFIGFGTKGQEKKWTLKECVNHALVNNIVIQQSSLDAEIAVVN
KKMAFARFLPSISGTVSHSWNIGLNQNITTGLLENQTTQFTSAGITFGIDIYKGLQNQNQ
LRKANLSKIASEYQLTKIKEDISLNVINAYLQVLFNKESLKVQQEQLIFSTEQKKKTTEL
VNAGVVPKGDLLDMNATIATNTQRVVSAENAVLISKLSLAQLLQLKEYDTFDIADTEVEA
KLSAVLAETPNVIVNKAKQTRVELKLAQTNLEIAQKDIDIAKGAYQPNLQGYYNLNTRVS
YAKMIKGFEIDSQNPIKKIGFVQSTGDLVSSVNTVPVLGEASPFFQQINDNKGHSFGLQL
SIPIFNGFAVKNNVNRSKIIFQKSKLALEQQMLDLERTVYTAYTDTRGAQKAYEAALVVL
QARQKAVDYAKERYEVGLMNVFDYNQSQTQLSNAESEVLRTKYDYIFRTKILEFYFGIPI
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactaaaacaatgaaaaagacatcccacatacttatctttttaatattcata
gggtttggaactaagggacaagagaagaagtggactttaaaggaatgtgttaaccacgca
ttggtaaacaatatagttatacaacaatcttctctagatgcagagatagcagtagtaaat
aaaaaaatggcatttgctaggtttttaccttctattagtggaactgtatcccattcttgg
aatattggcttgaatcagaatataactacaggtttgttagaaaatcaaaccacacaattt
acctccgcggggataacatttggtatagatatttacaaaggattacaaaatcaaaatcaa
ttaagaaaggcaaatctctcaaaaatagcatcagaatatcagttgactaagataaaagaa
gatatttcgctaaatgttataaatgcctatttgcaagttttatttaataaagaaagttta
aaagtacaacaagaacagttgatatttagcacagaacaaaaaaagaaaacaacggagtta
gtaaacgctggtgtagttcctaaaggcgatctattagatatgaatgctacaattgcaaca
aatactcaaagggtcgttagtgcagaaaatgcggtattaatttcaaaattaagtttggct
cagttactacaattgaaagaatacgatacttttgatattgccgatactgaagttgaagcc
aaattaagtgcagtcttggcagaaacgcccaatgttattgttaataaagcaaaacagact
cgtgtagaactaaaattggcacaaacaaatttagaaattgctcaaaaagatattgatata
gcaaaaggagcctatcaacccaacctacaagggtattataatttaaatacgcgggtttct
tatgcaaaaatgattaaaggatttgaaatagattcacaaaatccaattaaaaaaataggt
tttgtacaatcaacaggtgatttagtttcctctgttaatacagttcctgtattgggagaa
gctagccccttttttcaacaaataaatgacaacaaaggacacagttttggattgcaatta
agtattccaatttttaacggttttgctgtaaaaaataatgtaaatcgctctaaaattatt
tttcaaaaatctaaattagccctagaacaacaaatgttggatcttgagcgtacagtttat
accgcttatacagatacgagaggagcccaaaaagcgtatgaagcagcgttggttgtttta
caagcaaggcaaaaagcagttgattatgcaaaagaacgatatgaggtaggattgatgaac
gtttttgattacaaccaatcgcaaacccaattaagcaatgcagaatccgaggtattgcgt
acaaaatatgattatatttttagaaccaagattttagaattttattttggaatcccaatt
ttttaa
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