Flavobacterium crocinum: HYN56_16555
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Entry
HYN56_16555 CDS
T06596
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fcr
Flavobacterium crocinum
Pathway
fcr01501
beta-Lactam resistance
fcr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN56_16555
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN56_16555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcr02000
]
HYN56_16555
01504 Antimicrobial resistance genes [BR:
fcr01504
]
HYN56_16555
Transporters [BR:
fcr02000
]
Other transporters
Pores ion channels [TC:
1
]
HYN56_16555
Antimicrobial resistance genes [BR:
fcr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN56_16555
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HYN56_16555
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HYN56_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2937
PCRF
Motif
Other DBs
NCBI-ProteinID:
AWK07475
UniProt:
A0A2S1YTR0
LinkDB
All DBs
Position
complement(3713193..3714629)
Genome browser
AA seq
478 aa
AA seq
DB search
MKNNRNIKYAGIACVLLSIVGCKTPAIVEKNENKTVPETYANNSLDTLNTGKVKWKTYFT
DENLNSLIDIALKNNQELNITLQEIEIAKSEVKARKGEYLPFVGFSAGADVTKSGRYTST
GSGEATTEIMPGKETPDPLPNFRFALTSSWEIDIWNKLHNAKKAALNRYLGSIEGKNFVV
TNLIAEIAESYYELLALDNQLEIIKQNIDIQSNALRIVKIQKEAARVNELAVRRFEAQIL
STQSLQFDIQQQITETENKINFLLGRFPQKIARNSDTFSTIAPADVHAGIPSQLLENRPD
IKKAEMELIAAKLDIKSAKAQFYPSLGISAGIGYEAFNTKYLLTSPESLLYSIAGDLVAP
LINRNAIKASYLTASAKQIQAVYNYERTLVNAYVEVANQLSKIQNTAQSYDLKSKQVQAL
NESVQISNNLFSSARADYMEVLLTQKDALESKFELIETKKQQMNAFVNVYRALGGGWN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataacagaaatataaaatacgcaggcatcgcctgcgtattactctctatcgtt
ggctgtaaaactcctgctatagtagaaaaaaatgaaaacaaaacagtacccgaaacttac
gctaataacagtttagacacgctcaataccggaaaagtaaaatggaaaacttattttacg
gatgaaaacctgaacagtttgattgatattgcactgaaaaataatcaggagttaaacatt
acacttcaggaaatcgaaattgcaaaaagtgaagtaaaagccagaaaaggagaatacctg
ccgtttgtaggttttagtgccggtgctgatgtaactaaatccggaagatatacaagcaca
ggctcaggtgaagctacaacagaaattatgcctggtaaagaaacaccggatccgcttcca
aattttcgctttgcgcttacatcaagctgggaaatagatatttggaacaaacttcataat
gctaaaaaagcagctttgaatcgttatttaggttctattgaaggaaagaattttgtagtt
accaatctgattgcagaaatagcagaatcgtattatgaacttttggctttggacaatcaa
ctggaaattatcaaacaaaatattgatattcagtctaatgcattaagaattgtaaaaatt
caaaaagaagctgccagagttaatgaactggcggtacgcagatttgaagctcagatttta
agtacgcaaagtctgcagtttgacattcaacaacagattacagaaaccgaaaataaaatc
aattttttattgggtcgttttcctcagaaaattgcaaggaacagcgatactttcagtact
atagctcctgcggatgttcatgccggaataccctcccagcttctggaaaatcgtccggat
atcaaaaaagcagaaatggaattaatcgccgcaaaactggatataaaatcagcgaaagca
caattctatccttcacttggaatttcagccggaattggatatgaggcttttaataccaaa
tatttgctgacatcaccagaatctttattgtattccattgcgggtgatttggttgctcct
ttaattaaccgaaatgctattaaggcaagctatcttactgcaagcgccaaacaaattcag
gcagtttacaattatgaaagaactttggtaaacgcttatgttgaagttgcgaatcagctt
tctaaaattcaaaatacagcacaaagttatgatttgaagtcaaaacaggttcaggcttta
aacgagtctgtgcaaatatccaataaccttttcagttctgcgagagcagattatatggaa
gttttgctaactcagaaagatgctttagaatctaaatttgaacttattgaaaccaaaaaa
cagcaaatgaatgcttttgttaatgtttacagagcattaggaggcggctggaactaa
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