Flavobacterium crocinum: HYN56_21205
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Entry
HYN56_21205 CDS
T06596
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fcr
Flavobacterium crocinum
Pathway
fcr01501
beta-Lactam resistance
fcr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN56_21205
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN56_21205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcr02000
]
HYN56_21205
01504 Antimicrobial resistance genes [BR:
fcr01504
]
HYN56_21205
Transporters [BR:
fcr02000
]
Other transporters
Pores ion channels [TC:
1
]
HYN56_21205
Antimicrobial resistance genes [BR:
fcr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN56_21205
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HYN56_21205
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HYN56_21205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
COLEC12
HEPN_SAV2148
Motif
Other DBs
NCBI-ProteinID:
AWK06610
UniProt:
A0A2S1YR80
LinkDB
All DBs
Position
4978088..4979506
Genome browser
AA seq
472 aa
AA seq
DB search
MKNHITKIVTFAILITTLISCKVSKDIETPKDAFPENFRNASVSSDTTSIADVEWKNFFT
EKDIIKLIDSAVARNNDLQIAEKNIEIAQYRFTQSKWGNVPQVNLFVNASTSNPSDNSFT
GLNLNQAIGAKHIDDYSAGASLSWEADIWGKIRNQKKGAYAGYLQSEEVKKALQTNIVAN
VSRGYYNLLMLDAQLDIARQNLRLNDSTTNIIKLKYDAGQVTTLAIQQSEAQKLNSAQLI
PLLEQNIAIQENALSVLTGSFPNSKERSVRLSALEVKHNTAIGIPSALVSRRPDVKSAEL
ALKVANANVGITKADLYPALRITAQGGVNSFETSNWFNIPASLFGTVAGGLTQPLLNNKR
VRTQYNIAVAEREKAVLAFRQQVLVAVSEVSDALVKVEKLQQQETFLKEKVKTLQQAIKN
ANLLFKNGMAEYLEVLTAQANLLQSELELADIKRQQLTANTDLYRALGGGWK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcatataaccaaaatcgtgaccttcgccattctgatcacgactttaatatcc
tgtaaagtctcaaaggatattgaaactccaaaagatgcatttcctgagaatttcaggaat
gcatcggtttcgagtgatacaacaagtattgccgatgtggagtggaaaaacttctttaca
gaaaaagatattataaaattaatcgacagtgccgttgcgagaaacaacgaccttcagatt
gccgaaaagaacattgaaattgcacaataccgttttacacaatccaaatggggaaatgta
cctcaggttaacttatttgtaaacgcaagcacaagcaatccgtcagacaatagttttacg
ggattgaacttaaatcaggcaattggagctaaacatattgacgactattctgctggagct
tctctttcttgggaggctgatatttggggaaagatcagaaaccaaaagaaaggggcttac
gcaggatatcttcagtctgaagaagtaaaaaaagcattgcagactaatattgttgccaat
gtttcaagaggatattacaatcttttgatgctggatgcgcaattggatattgccagacaa
aatcttcgtttaaatgatagtacaaccaatattatcaaattaaaatacgatgctggtcag
gtaactactttagcgattcaacaatcggaagcacaaaaattaaactccgcgcaattgatt
ccgttattggaacaaaatattgcgattcaggaaaatgctttaagtgttttaacaggttct
tttccaaattctaaagaaagatcggttcgtttaagtgcacttgaagtaaaacacaataca
gcaattggaattccgtctgctttagtcagcagaagaccagatgtaaaaagtgccgaatta
gccctaaaagtcgcaaacgcaaacgtaggaatcacaaaagccgatttatatccagcctta
agaattacggctcaaggtggtgtaaattcttttgaaaccagcaattggttcaacattccg
gcttcattattcggaactgttgcgggaggcttaacacaaccgcttttaaacaacaaaaga
gtgagaacgcaatataatatcgctgtcgcagaaagagaaaaggcggttttagcttttaga
caacaagttctagttgcggtaagcgaagtttcggatgctttggttaaagtagagaaatta
cagcaacaggaaacgttcttaaaagaaaaagtaaaaacgctacaacaagctattaaaaat
gctaaccttttattcaaaaacggtatggcagaatatcttgaagttttaaccgctcaggca
aatttattgcaaagcgaattggaacttgctgatatcaaaagacaacaacttacagccaac
acagatttgtaccgcgctcttggcggaggctggaaataa
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