Flavobacterium sp. GSB-24: FLGSB24_29900
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Entry
FLGSB24_29900 CDS
T10693
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf01501
beta-Lactam resistance
flf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FLGSB24_29900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FLGSB24_29900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flf02000
]
FLGSB24_29900
01504 Antimicrobial resistance genes [BR:
flf01504
]
FLGSB24_29900
Transporters [BR:
flf02000
]
Other transporters
Pores ion channels [TC:
1
]
FLGSB24_29900
Antimicrobial resistance genes [BR:
flf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FLGSB24_29900
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
FLGSB24_29900
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
FLGSB24_29900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2937
Motif
Other DBs
NCBI-ProteinID:
BDU26246
LinkDB
All DBs
Position
complement(3509962..3511398)
Genome browser
AA seq
478 aa
AA seq
DB search
MKNNRNIKYAGLACVMLSIAGCKTASIAEKTENRTVPENYADNGLDTLNTGKVKWRSYFT
DENLENLIDIALKNNQELNITLQEIEIAKSEVKARKGEYLPFVGFSAGADLTKSGRYTST
GSGEATTEIMPGRETPDPLPNYRFALTSSWEVDIWNKLHNAKKAALNRYLGSIEGKNFVI
TNLIAEIADSYYELLALDNQLEIIKQNIDIQTNALRVVKIQKEAARVNELAVRRFEAQIL
STQSLQFDIQQQITETENKINFLLGRFPQKITRSSNTFSTITPADVHAGVPSQLLENRPD
IKKAEMELIAAKLDIKAAKAKFYPSLGISAGIGYEAFNTKYLLTSPESLLYSIAGDLVAP
LINRNAIKAEYFTAGAKQIQAVYNYERTLVNAYVEVANQLSKIQNTAKSYDLKSKQVQAL
NESIQISNNLFSSARADYMEVLLTQKDALESKFELIETKKQQMNAFVNVYRALGGGWN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataacagaaatataaaatacgcaggtcttgcctgcgtaatgctctctatagcg
ggctgtaagacggcttctattgcagagaaaacagaaaacaggacagtacccgaaaactat
gccgataatggtttagatacgcttaacactggaaaagtaaagtggagaagctattttacg
gatgaaaatctagaaaacctgattgatattgcactgaaaaacaatcaggaattgaatatt
acgcttcaagaaatcgaaattgcaaaaagcgaagtaaaagccagaaaaggtgaatacctg
ccatttgttggctttagcgctggtgctgatctaaccaagtccggaaggtatacaagcaca
ggttcaggcgaggcaacaaccgagattatgcctggcagagaaacgcccgatccgcttccc
aattatcgttttgcccttacttcaagctgggaagtagatatttggaacaaactgcataat
gcaaaaaaagccgctttaaaccgatatttaggttccatcgaaggaaagaattttgtaatt
accaatttaattgcagaaatagccgattcgtactacgagcttctagctttggataatcag
ttggaaattatcaaacaaaatattgatatccagaccaatgctttaagagttgtaaaaata
cagaaggaggctgcccgagtaaacgaactggctgtacgaagatttgaagcgcagatttta
agcactcagagccttcagtttgatattcagcagcagataaccgaaacggaaaataaaatc
aatttcctgttgggacgttttccccagaaaattaccagaagcagcaatactttcagcact
ataactccagcagatgttcatgccggagtgccttctcagcttttagaaaatcgtcccgat
attaaaaaagccgaaatggaactaatcgctgcaaaactggatattaaagccgctaaagct
aaattttatccttcgctgggcatttctgctggaatcggatacgaggcttttaacactaaa
tatctgctgacttctccagaatctctattatattctatagctggcgatttagtagctcct
ttgattaacagaaatgcaattaaagcagaatactttactgctggcgctaaacagattcag
gctgtttacaattatgagagaacattggtaaacgcttatgttgaagtggccaaccaattg
tctaaaattcagaatacggcaaaaagctatgacttaaagtcaaagcaggtgcaggcttta
aatgagtctattcaaatatcaaacaacctatttagttctgccagggcagattatatggaa
gttttattgacccagaaagacgctttagaatctaagtttgaacttattgaaaccaaaaaa
cagcagatgaacgcctttgtaaatgtttacagagcactcggaggcggctggaattaa
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