Fulvivirga ligni: LVD16_15490
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Entry
LVD16_15490 CDS
T09288
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
flw
Fulvivirga ligni
Pathway
flw01501
beta-Lactam resistance
flw01503
Cationic antimicrobial peptide (CAMP) resistance
flw02020
Two-component system
flw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LVD16_15490
09132 Signal transduction
02020 Two-component system
LVD16_15490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVD16_15490
01503 Cationic antimicrobial peptide (CAMP) resistance
LVD16_15490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_15490
02044 Secretion system [BR:
flw02044
]
LVD16_15490
01504 Antimicrobial resistance genes [BR:
flw01504
]
LVD16_15490
Transporters [BR:
flw02000
]
Other transporters
Pores ion channels [TC:
1
]
LVD16_15490
Secretion system [BR:
flw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LVD16_15490
RTX toxin transporter
LVD16_15490
Multiple protein transporter
LVD16_15490
RaxAB-RaxC type I secretion system protein
LVD16_15490
Antimicrobial resistance genes [BR:
flw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LVD16_15490
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LVD16_15490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PI3K_p85B
Motif
Other DBs
NCBI-ProteinID:
UII19248
LinkDB
All DBs
Position
3622751..3624226
Genome browser
AA seq
491 aa
AA seq
DB search
MKAVRLLIFLMIISSGAFAQDTLKVNRWTLPECIDYAMGHNLNIRRSMLDLQSQEIELRQ
SKLAKLPDLNGNSQYGFSWGRSIDPTTNLFVENERIASGSASLSSSVLLFNGFRLRNTVY
QNKYALNSAEENLQANKNDVALGVSSYYINVLFTKELLENARKQLNSTDEQVTITQKQVD
AGALARSNLLDILAQKATNELNIVTAENDYTTAKIQLKQLLQLPPEEQIDIVIPEIDTAS
INPLMDETPIQIYETALNGWPSIKAAEYNSMSSEYAVRASKGFLYPSLSLNGGFYTRYSD
AADQLRFVPDGGNPVIIEQNPVIGYIDDGSLTEVRSIDNLTRPSGTYYDGYSFGDQVDDN
LSRSINLNLSIPIFNGFSARAGVQRSVINQKRAEINEKDVKYQLWQNIEQAYNDVVAAAK
SYKVSQIQVEARQESFRVIKQRYENGAANFTDFQIAENQLFQANSDLLRAKYDYVFKLKV
LDFYQGKKIEF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagttagattgcttatttttttaatgattataagttcaggggcatttgctcag
gatacactgaaagttaatcggtggacacttcctgagtgtattgattatgccatgggacat
aacctcaacattcgaagatctatgcttgatctccaaagtcaggagattgaacttaggcaa
tctaaattggctaagcttccggatttaaatggtaactctcaatatgggtttagctggggt
agatctattgaccctacaactaaccttttcgttgaaaatgagcgaatagcctcgggtagt
gctagtttatcaagtagcgtacttctttttaatggtttcaggctgagaaatacggtttat
caaaataagtatgcccttaattctgctgaagagaatttacaagccaataagaatgatgtt
gctctgggtgtttctagttactatatcaatgtgctgtttactaaagaattattagaaaat
gctcgaaagcagctaaacagtactgatgagcaggtaactattactcaaaaacaagtggat
gcgggtgcactcgccagatctaacttattggatattctggcccagaaggctactaatgag
cttaatattgttactgcggaaaatgattatactactgccaaaattcagttgaagcagtta
ttgcaattacctcctgaagaacaaattgatatcgttattccagaaatcgatactgcttct
attaatcctttaatggatgaaacaccaattcaaatttatgaaactgctctgaatggatgg
ccaagcattaaagctgcagagtataatagcatgagttctgagtatgcagttagagcttca
aaaggctttctttatccatcactttcattgaatggaggattttacacaagatattctgat
gctgcagatcaactaagatttgttcccgatggcggaaatcctgtaattatagagcaaaat
cccgtgattggatatatcgatgatggtagtcttacagaggttcgttcgatcgataacttg
actagaccttcaggtacttattatgatggctactcatttggtgatcaggtagatgataac
cttagtagatcaattaatcttaatttaagtattcctattttcaatggtttttcggctagg
gctggtgttcagcgctcagtaataaaccaaaaaagagcagagattaacgagaaggatgtt
aaataccagctttggcaaaatatagagcaggcttataatgatgtagtggcagctgcaaaa
tcatataaagtttctcaaatacaagtagaagccagacaggaatcatttagggtgattaaa
cagagatatgaaaacggtgcggctaacttcactgactttcaaatagctgagaatcagctt
tttcaagctaattcggatttgcttagggcaaaatatgattatgtattcaaactcaaagta
ttagacttttatcagggtaaaaaaatagaattttaa
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