Fulvivirga ligni: LVD16_21065
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Entry
LVD16_21065 CDS
T09288
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
flw
Fulvivirga ligni
Pathway
flw01501
beta-Lactam resistance
flw01503
Cationic antimicrobial peptide (CAMP) resistance
flw02020
Two-component system
flw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LVD16_21065
09132 Signal transduction
02020 Two-component system
LVD16_21065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVD16_21065
01503 Cationic antimicrobial peptide (CAMP) resistance
LVD16_21065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_21065
02044 Secretion system [BR:
flw02044
]
LVD16_21065
01504 Antimicrobial resistance genes [BR:
flw01504
]
LVD16_21065
Transporters [BR:
flw02000
]
Other transporters
Pores ion channels [TC:
1
]
LVD16_21065
Secretion system [BR:
flw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LVD16_21065
RTX toxin transporter
LVD16_21065
Multiple protein transporter
LVD16_21065
RaxAB-RaxC type I secretion system protein
LVD16_21065
Antimicrobial resistance genes [BR:
flw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LVD16_21065
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LVD16_21065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UII20336
LinkDB
All DBs
Position
complement(5016884..5018326)
Genome browser
AA seq
480 aa
AA seq
DB search
MRYLLTFLFIAAVATAHAQTVYTLENIIDRAQAQSPAAKRAETLKENLYWQYRSYRSNYN
PQLRLSGSAPDYNLDYFSNRLDDGTIVFQSREQINSYVNLGVEQPLKWTGGTISVNSNLS
HFKDIQRDLTQYNTTLFNVLLEQPLFGFNSLRWDNRTEPLRFEESKRSYVEEMESISSVA
VDRFFAYLSAQINLQIAQFNLANNDTIYKIEQGRYNIGTTSKDKLLQVELQLLRSREDVA
EAQLDMETSRLLLRTYIGLSGDESIQLVLPDYIPEFEVKLGEALEYARQNRADYIAFERR
KLEAQREVAQARANRFQTNLRASYGSNNASSDVDNLYIDPNNQVRANITFDIPILDWGRN
KSRMRTAIANQRLVDYTIAQDEQTFEQEILTQVRQFDVLRTRLEITKKSDEVAQERYTVA
QNRYLIGKIDITNLNIAQTEKDDAKRAYISALQAFWSAYFNLRRLTLYDFEANKLLYTHE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttactaacttttttattcattgctgcagtggctacagcacatgcgcagact
gtttacaccctggaaaatatcattgacagggctcaggcacagtctccggccgctaaaagg
gcagaaacactaaaggaaaacctttattggcagtaccggtcataccgatctaattataat
ccacaattgagattaagtggttcagcaccagactataacctggattattttagtaatagg
ttagatgatggtaccatcgtttttcaaagtagagagcaaataaattcctacgtgaattta
ggtgtggaacaacctttaaaatggactgggggtacaatatctgttaactctaaccttagc
catttcaaagatattcagagagatttaacacagtataatactacgcttttcaatgtgctg
ttagaacagccgctttttggttttaacagcttaagatgggataatagaacagaaccttta
agatttgaagagtctaagcgcagttatgtagaagaaatggaatctatctcttcagtagct
gtagacaggttttttgcttatctatcagctcaaatcaatttgcagattgcccagtttaac
ctggctaacaatgatactatctataaaattgagcaagggaggtacaacattggtaccact
tcgaaggataaacttttacaagtggaattgcagctgttgagatccagggaagatgtggct
gaagctcaattagatatggaaacttccaggttgcttttaaggacatatattggattgtcg
ggagatgaatcaatacaattggtgttgccagattatattccagagtttgaggtgaagctg
ggagaagctttggagtacgcccgacagaatagagcagattatatagcgtttgagcgaagg
aaattggaggcacaaagggaagtggcgcaagccagggccaataggtttcagacaaacttg
agggcatcttacggtagtaataatgccagttcagatgtcgataatctttacatagatccc
aataatcaggtgagagcgaacatcactttcgatattcctattttagattggggacgaaac
aagtccagaatgcgtactgctatagctaatcagcgattggtagactatactattgcccag
gatgagcagacttttgagcaggaaattctcacgcaggtaaggcagtttgatgtattgaga
acgcgtcttgaaattactaaaaagtctgatgaggtggctcaggaaagatatactgtggct
caaaatcgctatttaattggtaaaattgatattactaaccttaatatagcccaaacagaa
aaagatgatgctaaaagggcatatatcagtgctttacaggccttttggtcggcatatttc
aacttaagacgtctgaccttatatgattttgaggctaataagttgctttatactcacgaa
tag
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