Flavobacterium panici: NLJ00_11390
Help
Entry
NLJ00_11390 CDS
T08520
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb01503
Cationic antimicrobial peptide (CAMP) resistance
fpb02020
Two-component system
fpb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NLJ00_11390
09132 Signal transduction
02020 Two-component system
NLJ00_11390
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_11390
01503 Cationic antimicrobial peptide (CAMP) resistance
NLJ00_11390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_11390
02044 Secretion system [BR:
fpb02044
]
NLJ00_11390
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_11390
Transporters [BR:
fpb02000
]
Other transporters
Pores ion channels [TC:
1
]
NLJ00_11390
Secretion system [BR:
fpb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NLJ00_11390
RTX toxin transporter
NLJ00_11390
Multiple protein transporter
NLJ00_11390
RaxAB-RaxC type I secretion system protein
NLJ00_11390
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NLJ00_11390
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NLJ00_11390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CsoSCA_N
DUF7615
Motif
Other DBs
NCBI-ProteinID:
UUF16696
LinkDB
All DBs
Position
2689480..2690835
Genome browser
AA seq
451 aa
AA seq
DB search
MNIKNNIKTVIILFLISKSAIAQQSWTLDQCIDYAVEHNLKLNEYKYNFQANKETHKQSV
RSLLPAIEGVLGYSTRYGRSIDPINNNYTTTSFFTNEYTLQSSVDLFKGFQKINTIRLTK
LLQNAAQQDLLHEKYMLAFRVMVAFYDIYFYQGLVVISKEQLEISQTNYDLVKRKIDLGL
KAGTDLYEAESTLVSDKLLLTQHENSLAIAQLKLIQEMNLGDISKISLAEPSNEFDMPDS
DPALEDYESIFKTAKSFVPLIKSEEFKTQAAMKDVSIAKGALYPTLTLFGAYGTGYYETS
FDENGKTIPFKNQFSNNAAQQVGFSLKIPIFNGWSAHSNIKQKKIEFERANNNLNLQKQE
LYRLIQELVQNQKAFEKEFEQSNQKIATRELAFKIEQRKYELGLISDIDLYQSKTLYANS
KNENLQVKIKLKVNKKTLDFYKGLSIFNIKN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaaaataatattaaaactgtaattatactctttttgatttctaaatcagca
atcgctcaacaatcttggacattagatcaatgcatagactatgcagttgagcacaatctt
aaattgaatgagtacaagtataattttcaagcaaataaagaaactcataaacaatctgtt
agaagcttattgcccgcaattgagggagttttaggttatagtactcgatatgggcgttct
attgaccctattaataataattatacaactacaagcttttttacaaacgaatatacttta
cagtcttctgttgatttatttaaaggcttccaaaaaataaatacaattagattgacaaag
ttattacaaaatgctgcacaacaggatttattacatgaaaaatatatgctggcttttaga
gtaatggtcgctttttatgatatttatttttatcaggggttagtagttatatctaaagaa
caattagaaatctcacaaactaattatgaccttgttaaaagaaaaatagatttgggctta
aaggctggtactgatttgtatgaagcagaatctacattagtttcagataaattactgctt
actcaacatgagaacagcttagcaattgctcaattaaaacttattcaggaaatgaattta
ggggatataagcaagatttcattagcagaaccatcaaatgaatttgatatgcctgatagc
gatcctgctttagaagattatgaatcaatttttaagacggcaaagagttttgttccgctg
ataaaatctgaagaatttaaaactcaggcagcgatgaaagatgtttcgatagcgaaaggg
gccttatatccaactttaacattatttggagcgtatggtacaggatattatgaaacttcc
tttgatgaaaacggaaaaacgattccattcaagaaccagttcagtaataatgcagcgcag
caggttggtttttcattaaagatcccaatttttaacggttggtctgcccactcaaatatc
aaacaaaaaaagatagaatttgaaagggctaataataatctgaatctacaaaaacaagaa
ctctatagactgattcaggaattagtgcaaaatcaaaaagcttttgaaaaagaattcgag
caaagcaatcaaaaaatagcaacaagagaacttgcatttaagatagaacagagaaagtat
gaattaggattaataagtgatatagacctgtatcagtcaaaaactctgtatgctaactcc
aagaatgaaaatttgcaggtaaaaataaaactaaaagtcaacaaaaaaacattggatttt
tataaaggattatcaatttttaacatcaagaactaa
DBGET
integrated database retrieval system
