Flavobacterium panici: NLJ00_17985
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Entry
NLJ00_17985 CDS
T08520
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb01503
Cationic antimicrobial peptide (CAMP) resistance
fpb02020
Two-component system
fpb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NLJ00_17985
09132 Signal transduction
02020 Two-component system
NLJ00_17985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_17985
01503 Cationic antimicrobial peptide (CAMP) resistance
NLJ00_17985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_17985
02044 Secretion system [BR:
fpb02044
]
NLJ00_17985
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_17985
Transporters [BR:
fpb02000
]
Other transporters
Pores ion channels [TC:
1
]
NLJ00_17985
Secretion system [BR:
fpb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NLJ00_17985
RTX toxin transporter
NLJ00_17985
Multiple protein transporter
NLJ00_17985
RaxAB-RaxC type I secretion system protein
NLJ00_17985
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NLJ00_17985
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NLJ00_17985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UUF13152
LinkDB
All DBs
Position
complement(4275156..4276466)
Genome browser
AA seq
436 aa
AA seq
DB search
MNIKNIYCTLIVLFFCIFKTNAQEVLTIEEAMKIALENNFEIKIAKNNSTISETNVTVGN
AGILPTATANIVDNNSVTNSTQVRQDGTSTTLNNAKNNSLTYGVSLGWTVFDGMRMFARY
DQLKELQKLGDSELKRTILVKIGQVNAAYYDLVQQQHQLAALDTTIVISKQRVELAQNRF
TIGKASKLEVLNAQVDLNTDQVTLLRQKESYANAKILLNQYLARDPKINFKVTDVVTVDE
KLVLADLMNLAQKQNPALESQIINKRIAELQLKQVKASRYPTVNLTSGYNFAESQSSLGF
TSENSSRGFTYGFNASMNIFDGFNQHRNEKVAKLQIENSQIAIDQQNMILNTQLSTAFQT
YLTNLELIDLEENNEAIARQNLEITLDKFRIGTITTIDFRTAQLNYVNAKVRYSNAQYEA
KLSEIALKELAGNINF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaagaatatatactgcactttaatagttctgttcttttgcatttttaaaaca
aatgcacaggaagttttgactattgaagaagcaatgaaaatcgctttagagaataatttt
gagattaaaattgccaaaaataattcgacaataagcgaaacaaatgttactgtaggaaac
gccggaatattgccaacagctacagctaatattgttgacaacaatagtgttaccaactca
actcaggtacgtcaggacggaacatcaactacattaaacaatgcaaaaaacaacagttta
acgtatggagttagtttaggctggacagtttttgacggcatgagaatgtttgcgagatac
gatcagttaaaagaacttcaaaaattaggcgattctgaattaaaaagaactattctcgta
aaaattggtcaggtaaatgctgcttattatgatttggttcagcaacagcatcaattagcg
gctttagatactacaattgtaatttctaaacaaagagtagaattagcacaaaatcgtttc
accattggtaaagcttcaaaattagaagttttaaatgcgcaggttgatttaaatacagat
caggttactttattaagacaaaaagaatcctatgcgaatgctaaaatattattgaaccaa
tatttagcgcgtgatcctaaaattaatttcaaagtaactgatgttgttactgttgatgaa
aaactggttttggccgatttaatgaatttggcacaaaaacaaaatccggctctggaatcg
caaattatcaataaacgtattgccgaattacagctgaaacaagtaaaagcaagcagatat
ccaactgtaaatttaacttctggttataattttgccgaaagtcagtcgagtttaggattt
acaagtgaaaactcttcaagaggttttacctatggttttaatgcttcgatgaatattttt
gacggatttaatcagcatcgaaatgaaaaagtagccaagcttcaaatcgaaaattctcaa
attgcaatcgatcagcaaaatatgattttaaacacgcaattaagcactgcttttcaaacg
tatttaaccaatttagaacttattgatttagaagaaaataacgaagcaatcgccagacaa
aatttagaaattactttagataaattcagaattggaactatcacaaccattgatttcaga
acggctcagctcaattatgtaaacgcaaaagttcgttacagcaatgcacaatacgaagca
aaattatctgaaattgccttaaaagaattagcaggaaatattaatttttaa
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