Flavobacterium panici: NLJ00_23915
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Entry
NLJ00_23915 CDS
T08520
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLJ00_23915
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_23915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_23915
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_23915
Transporters [BR:
fpb02000
]
Other transporters
Pores ion channels [TC:
1
]
NLJ00_23915
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLJ00_23915
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NLJ00_23915
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NLJ00_23915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5096
Motif
Other DBs
NCBI-ProteinID:
UUF14298
LinkDB
All DBs
Position
complement(5731446..5732885)
Genome browser
AA seq
479 aa
AA seq
DB search
MYKVKLYQYSIALGLCLAVAGCKAPAAETASTSAPVPEAFGSVKSQDTTNTSTLKWKDFF
KDQNLVELIDVALKNNQELNMTLQEIEIAKNDIRVRKGALLPTVGVRAGAGIEKVGRYTS
QGAGDATTEIKPGIETPDPLPDYTIAAYANWEVDIWKKLRNSKKAAVNRYLATVEGKNFV
ITNLIAEIADNYYELLALDSQLEIVKQTITLQTNALEIVKIQKQAARATELGVQKFQAEV
LTSKSLEFDILQKIKENENKINFLLGRYPQDIKRDKTNFTDLLPAAVNSGIPSQLLTNRP
DVKQAELELVAAKLDVKVARAEFYPSLDISVAFGVQAFKPSYLFTFPESILYSLAGDIAA
PLINRNAIKAEFSSANARQLQALYNYDRTILNAYLEVSTQLSKIDNLQKGYDLKSQQVDA
LNKSIDVSNDLFKSARVDYFEVLMTQRDALEAKLELIDTKKEQLNAAVHVYRDLGGGWK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagttaaattatatcaatacagtattgcattgggtttatgtcttgccgtggca
ggatgtaaagcccctgcagctgaaacagcaagtacaagcgctccggttccggaagcattt
ggaagcgtaaaatcgcaggacacaacaaatacatcgactttaaaatggaaagatttcttt
aaggatcaaaaccttgtagagttgattgatgttgccttaaaaaacaatcaggaactgaat
atgactttgcaggaaattgaaattgcaaagaatgatatcagagttcgtaaaggggcgcta
ttgccaactgtcggcgttcgtgccggtgcaggaatcgaaaaagtaggacgttacacaagc
cagggtgcgggtgatgcaacaacagaaattaaaccgggaatcgaaactccagatccgtta
ccggattataccattgcagcttatgcaaactgggaagtagatatctggaaaaaactgcgt
aattctaaaaaagcagctgtaaaccgttatttagctacagttgaaggtaaaaattttgtg
attacaaaccttattgctgagattgctgataattattatgaattattagctttagacagc
caattagagattgtaaaacaaacgattactttacagacaaacgctttagaaattgtaaaa
attcaaaaacaagcggcgagagcaactgaacttggagttcagaaatttcaggctgaggtt
ttaacttcaaaaagtctggagtttgatattttgcagaaaataaaagagaacgaaaacaaa
atcaactttttgttaggacgatatccacaggatattaaaagagacaaaaccaattttaca
gatttgcttccggcagctgtaaactctggaattccatctcaattattaacaaatcgtcca
gatgttaaacaagcagaattagaattggttgctgcaaaattagatgtaaaagtcgctcgt
gcagaattttatccttcattagatatttcagtagcttttggagttcaggcttttaaacca
tcttatttgtttacattccctgaatcgattttatattcattagccggagatattgctgcg
ccgttaattaacagaaatgcgattaaagcagaattttctagtgctaatgcaagacagctt
caggcgttgtacaattacgatcgtaccatcctgaatgcatatttagaagtttcaacccag
ctttctaaaattgataatcttcaaaaaggttacgatttaaaatcacagcaagttgacgct
ttaaataaatcaattgatgtttcaaacgatttgtttaaatcagcaagagtagattatttt
gaggttttaatgacgcaaagagatgcattagaagctaaattagaattaatagatactaaa
aaagaacaattaaatgctgcagttcatgtttacagagacctgggcggcggatggaaataa
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