Flavobacterium psychrophilum JIP02/86: FP0504
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Entry
FP0504 CDS
T00548
Name
(GenBank) Probable outer membrane efflux protein precursor
KO
K12340
outer membrane protein
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps01501
beta-Lactam resistance
fps01503
Cationic antimicrobial peptide (CAMP) resistance
fps02020
Two-component system
fps03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FP0504
09132 Signal transduction
02020 Two-component system
FP0504
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FP0504
01503 Cationic antimicrobial peptide (CAMP) resistance
FP0504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fps02000
]
FP0504
02044 Secretion system [BR:
fps02044
]
FP0504
01504 Antimicrobial resistance genes [BR:
fps01504
]
FP0504
Transporters [BR:
fps02000
]
Other transporters
Pores ion channels [TC:
1
]
FP0504
Secretion system [BR:
fps02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FP0504
RTX toxin transporter
FP0504
Multiple protein transporter
FP0504
RaxAB-RaxC type I secretion system protein
FP0504
Antimicrobial resistance genes [BR:
fps01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FP0504
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FP0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RXYLT1_C
Motif
Other DBs
NCBI-ProteinID:
CAL42610
UniProt:
A6GWY7
LinkDB
All DBs
Position
complement(684952..686265)
Genome browser
AA seq
437 aa
AA seq
DB search
MKIKAKLLIVISFLGVTFGYAQEKRVLSLKEAISLVTNNSNEAALANIKVSTAKLEMETL
KNNQYPSLKISGQFLQLTDANIDPKIKLGASGTAVKVNQLFLGQANVSMPLFNGFKLKNS
IWASENLYKAETANAANTKEKLSLYVVELFAKLYQSQQTTTLIEDNLKSAQQRTKDFSAM
VHNGLMARNDLLKAQLQESNIQLSLDTAKKNVNIINYQLVTILQLPENTQIDIDIETIKN
DIVRNKNIEIQAKRNDLEALTYQQKASEAGIKIAKSGYYPALALVGGYIAFDLKDVMTVT
NAMNVGVGLSYDLASVFKNGKEVKLAQSKSEQTKTAVTILTNKIKEETHEAQENYNLSLN
QNVVYKQAVEQATENYRIVKDKYDNSLSTTNDLLEADVQQLQTKINLALSQADIALKYYQ
LQFAEGKLINSFNTPKN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagcaaaattattaattgtcatttcttttttaggggtaacttttggatat
gcgcaagaaaaaagagtcctctctcttaaagaagccatttcgctagtaactaacaatagt
aatgaggctgcattagccaatataaaggtgagtactgccaaattggaaatggaaacccta
aaaaataaccagtacccgagtctgaaaatttctgggcaatttttgcaactaacagatgct
aatatcgatcctaaaattaagctaggagcaagtggtacggctgtcaaagtaaatcaatta
tttttaggtcaagccaatgtttcgatgcctctttttaacggatttaagctaaaaaacagc
atttgggcttcagaaaatttatacaaagccgaaacagcaaacgctgcaaatacaaaagaa
aaactaagcctttatgtggtcgagttatttgcaaaactataccaatcgcaacaaacaaca
acactaatcgaagacaatctaaaaagcgcacaacaacgcaccaaggatttttcggcaatg
gtacacaacggattgatggctagaaatgatttattgaaagcacaattacaagaatcaaac
attcaactttccttagatacggctaaaaaaaatgtaaatataattaattatcaattagtt
acaattttacaattaccagaaaacactcaaattgacatagatattgaaaccattaaaaat
gatatagttagaaataaaaatattgaaatccaagccaaaagaaatgatctagaagcctta
acttaccaacaaaaagcatcggaagctggcataaaaatagcaaaaagcggttattatcca
gcattagcattagtaggtggttatattgctttcgatctaaaagatgtaatgactgtaaca
aacgcaatgaatgttggggttggattaagttatgatttggcttccgttttcaaaaacgga
aaagaagtaaaattagcccaaagcaaatcagaacaaaccaaaactgccgttaccatttta
accaataaaataaaagaagaaacacatgaagcacaagaaaactacaacctttctttaaac
caaaatgtagtttacaaacaagcagtagaacaagcaactgaaaactaccgaattgtaaaa
gacaaatacgacaatagtttatctaccaccaatgatttgttggaagccgatgtgcaacaa
ctacaaaccaaaataaatctagcattatcgcaagcagatattgccctaaaatattaccaa
ctgcaatttgcagaaggaaaactaatcaattcattcaacacacctaaaaactaa
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