Flavobacterium psychrophilum V4-24: IA04_04290
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Entry
IA04_04290 CDS
T03660
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw01501
beta-Lactam resistance
fpw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IA04_04290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IA04_04290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpw02000
]
IA04_04290
01504 Antimicrobial resistance genes [BR:
fpw01504
]
IA04_04290
Transporters [BR:
fpw02000
]
Other transporters
Pores ion channels [TC:
1
]
IA04_04290
Antimicrobial resistance genes [BR:
fpw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IA04_04290
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
IA04_04290
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
IA04_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIG36543
LinkDB
All DBs
Position
949134..950570
Genome browser
AA seq
478 aa
AA seq
DB search
MYKKIKTYQFLIPLGICLAVVSCKTPEVVSSSTKTIPESYITANKDTINTANIPWKTFFK
DQNLVDIIDVALKNNQELMITLQEIEIAKNDIRMRKGALLPSFGLRAGAGIEKVGTYTSQ
GAGDASAEITPGNKVPENLQNYTLAAVAHWEIDIWKKLRNSKKAAVSRYLSTIEGKNFVI
TNLIAEVADSYYELQALDNQLGIVKQNIILQSNALEIIKIQKQAARATELAVQKFEAEVL
SSKSKEFDILQDIKQTENRINFLLARYPQEIKRDNSNFLKLLPSIIRSGIPSQLLANRPD
IKQAELQLVAAKLDVKVARAEFYPSLDISGAIGLQAFNPSYLFQLPESLLYSLAGDIAGP
LINRNAIKAEFKNANARQLQAMYNYERTILNAYLEISNQLSKIDNLQKRYDLKSQQVEAL
NKSIEVSNDLFKSARVDYFEVLMTQRDALETKLELIETKKEQLNSVVHVYKELGGGWK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaaaataaaaacatatcaattccttatcccgctaggcatttgcttagcggtg
gtaagttgtaagactcctgaagttgtatcatcaagcactaaaacaatcccagaatcatat
attactgcaaataaagatactataaatacagctaatattccttggaaaacattttttaaa
gatcaaaatttagtagatataatcgatgttgcgctaaaaaataatcaggaacttatgatt
actttgcaggaaattgaaatagcaaagaatgatattcgaatgcgaaagggagcattatta
ccttcttttggtcttcgtgcaggtgccggaattgaaaaagttgggacatatactagccaa
ggagcaggagatgcatctgcagaaataacaccaggcaataaagtacctgaaaacctgcaa
aattatactcttgctgctgttgcacattgggaaattgatatttggaaaaagctacgcaat
tcaaaaaaagcagcagttagtaggtatttatctactattgaaggtaaaaattttgtaatt
acaaatcttattgcagaagtagccgattcgtattatgaattgcaagcactcgataaccaa
ttaggcattgtaaaacaaaatataatattacaatcgaacgcattagaaattataaaaatc
cagaaacaagcagctagggctactgaattggcagttcaaaaatttgaagcagaagtatta
tcatctaaaagtaaagagtttgatattcttcaggatataaaacaaacagaaaatagaatt
aactttttgttagctcgctatccgcaggaaataaaaagagataatagtaactttctaaag
ttgttaccatctattattcgatcaggaattccttcgcaattattagcaaatcgtcctgat
attaagcaagctgagttacaattagtcgcagcaaaattagatgtaaaagtagcaagagca
gaattttatccttcattagatatatctggagcaataggattgcaagcatttaatccctct
tacttgtttcaattgccagaatcattgctttactctttagctggcgatattgcagggcca
ctaattaatagaaatgcaattaaagccgaatttaaaaatgcaaatgctcgccaacttcaa
gcaatgtataattatgagcgtactattttaaatgcttatttagaaatttcgaaccaactt
tctaaaattgataatttgcaaaaaaggtatgatttgaaatcacaacaagtagaggctctt
aacaaatctattgaggtttctaatgatttatttaagtcagctcgagtagattattttgag
gtattgatgacacagcgcgatgctcttgaaacaaaactggaattaattgaaacaaaaaaa
gaacaactaaactctgtagttcatgtttataaagagctaggaggcggttggaaataa
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