Flavobacterium sediminis: DI487_15550
Help
Entry
DI487_15550 CDS
T06625
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fse
Flavobacterium sediminis
Pathway
fse01501
beta-Lactam resistance
fse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DI487_15550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DI487_15550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fse02000
]
DI487_15550
01504 Antimicrobial resistance genes [BR:
fse01504
]
DI487_15550
Transporters [BR:
fse02000
]
Other transporters
Pores ion channels [TC:
1
]
DI487_15550
Antimicrobial resistance genes [BR:
fse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DI487_15550
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DI487_15550
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DI487_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2963
Uds1
Motif
Other DBs
NCBI-ProteinID:
AWM15128
UniProt:
A0A2U8QYF1
LinkDB
All DBs
Position
complement(3348044..3349483)
Genome browser
AA seq
479 aa
AA seq
DB search
MKNKIRIYKYAGITCVLLALASCKLPGNITPRQENNTVPEAYAALAQDTVNSGKLQWKNY
FTDPYLQALIDTALVNNQELNITLQEIEISRNEIRARKGEYLPFIGLKGGAGFEKASRYT
NIGAMEATTEIEPGKEMPEPLQDYMAGAYATWEVDIWNKLHNAKKAAVSRYLSTVEGKNF
MVTNLISEIADSYYELLALDNQLEVVNQNITIQTKALDIVKLLKQAARSNELAVKRFQAQ
VLKTQEMQFEIKQKIVETENRINFLIGRFPQHVDRSSDSFDNLVPNVVHAGLPSDLLANR
PDIKQAELELAATKLDVKSAKALFYPSLGISAGIGYKAFNPSYLVKPESLMYSLAGDLVA
PLINRNAIKATYFNANSKQIQAVYDYERTILKAYIEVSNQMSKIQNLESSYNLKTQEVDA
LTQSITISNDLFKSARADYMEVLLTQRDALEAKFDLIEIKMQQMNAMVTIYRALGGGWN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaataagaatatacaaatacgcaggtataacctgcgtattgttagcatta
gcgtcttgtaagttacccggtaatataacgccaagacaagaaaacaatacagttccggaa
gcttatgctgctctggcacaggatactgttaattcgggaaaattacagtggaagaactat
tttacagatccgtatttacaagctttgatcgatactgcattggtaaacaatcaggagcta
aacattacgttacaagaaatagagatttccagaaatgaaatcagagcacgtaaaggtgag
tatttaccgtttatcggtctaaaaggaggagccggatttgaaaaagcatcccgatatacg
aatattggtgctatggaggcaacaactgaaattgaacccggtaaagagatgcccgagccg
cttcaggattatatggcaggtgcatatgcaacttgggaagtagatatctggaacaagcta
cacaatgctaaaaaagcagcggttagccgttatttgtcaaccgttgaaggaaagaacttt
atggtgaccaatctgatctctgaaatagcagattcttattatgaattattagctttagac
aatcagttggaagtagtcaatcaaaatattaccattcagactaaagctttagatattgtt
aaactattgaaacaggcagcccgttctaatgaattggcagtaaaaagatttcaggctcag
gtattaaagacccaagaaatgcagtttgagatcaagcagaaaattgtggaaactgaaaac
agaattaatttcctgatcggtagatttccacaacatgttgatagaagttcggatagtttt
gacaatttggttcctaatgtagtacatgcaggtttgccgtctgatttattagctaatcgt
ccggatattaaacaagccgaactagaattggcagcaacaaaactcgatgtgaaatcagct
aaggcattattttatccttcattaggtatttcagcaggaataggatataaagcatttaat
ccgagttatctggtaaaacctgaatctttaatgtattcattagcaggtgatttagttgct
cctttaattaaccgaaatgctattaaagcaacatatttcaatgctaattcaaaacaaatt
caggcggtatatgactatgagagaacaattcttaaggcttatattgaagtttctaaccaa
atgtcaaaaattcagaatttggagagtagttacaacttgaaaactcaggaagtagatgct
ttaacacagtcaattacgatttccaatgacctgtttaaatcagccagagctgattatatg
gaagttttgttaacgcaaagagatgctttggaagctaaatttgacctgattgaaataaaa
atgcagcaaatgaatgctatggttactatttacagagcccttggtggtggatggaattaa
DBGET
integrated database retrieval system
