Fusobacterium varium: FV113G1_29780
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Entry
FV113G1_29780 CDS
T05280
Name
(GenBank) outer membrane efflux protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
fva
Fusobacterium varium
Pathway
fva01501
beta-Lactam resistance
fva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FV113G1_29780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FV113G1_29780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fva02000
]
FV113G1_29780
01504 Antimicrobial resistance genes [BR:
fva01504
]
FV113G1_29780
Transporters [BR:
fva02000
]
Other transporters
Pores ion channels [TC:
1
]
FV113G1_29780
Antimicrobial resistance genes [BR:
fva01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FV113G1_29780
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
FV113G1_29780
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
FV113G1_29780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7607
Motif
Other DBs
NCBI-ProteinID:
BBA52627
LinkDB
All DBs
Position
3312473..3313894
Genome browser
AA seq
473 aa
AA seq
DB search
MNKKIILALILSTFLGCSSIPKINKNEMITPNNISTDIFENQKLVFSNVNWWKIYNDSAL
NQLIDFALKENNDLKIAKLNIAKANEAVNLTKAESGITINLTGDLKREKLGKNGTTPPPF
GGKIINIGSVGLQADYNIDLFNKVASLTSEQKYKSEAMKLNSKWVELDISNRVAKLYVYW
KYLYQENTILTEQKNILTEIEKLQTQNLKIGNGIEDDIWTVQEEIRTINMLLKENELNKQ
LTINNLNILTGNKYSSEISSLLEKNSKNLNNLFKEKVNIPSSISSDIIVNRPDVEYYLML
IKGQEKHLEAAKADFYPQFSITGQYGFEGINFNKILRKDSLLGFIGPSIYLPIFHSGAIK
STYKIAGTDMNIFIEEYNKAVINAYNDVDNELYKTKTLWSTLNSSEENFKVETDLLSRDK
KRFQIGTISKHDYLSQKYNWYNSKLDNEQHHFNLYTQQLQLINSLGGVYKLDK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaattattttagcacttatattatcaacctttttaggttgttcatcaata
cccaaaattaataaaaatgaaatgattacccctaataatatctctactgatattttcgag
aatcaaaaactggtattttcaaatgtgaattggtggaaaatatacaatgactctgctctt
aaccaattaatagattttgctttaaaagaaaataatgatttaaaaatagctaaacttaat
attgcaaaagctaatgaggcagtaaatcttacaaaagctgaatctggaattacaataaat
ttaacaggagatttaaaaagggaaaaacttggaaaaaatggaactactcctccaccattt
ggaggaaaaataattaatattggaagtgttggacttcaggctgattataatattgattta
ttcaataaagttgcttcattaacatcagagcaaaagtataagtctgaagcaatgaaatta
aattcaaaatgggtagagctcgatatatctaacagagtagctaagctttatgtttactgg
aaatatttataccaagaaaatactattcttactgaacaaaaaaatattcttactgaaata
gaaaaactacaaactcaaaatttaaaaattggaaatggtatagaagatgatatctggaca
gttcaagaagaaataagaacaattaatatgcttcttaaagaaaatgaattaaataaacag
cttacaataaataacttaaatattcttactggcaataagtatagtagtgaaatatcttct
ctcttagaaaaaaattctaaaaatttaaataatttatttaaagaaaaagtaaatattcct
tcatctatatcctctgatataattgtaaacagacctgatgtagagtattatctcatgctg
ataaaagggcaggaaaaacacttagaagctgctaaagcagatttttatccacaattttct
atcacaggtcaatatggttttgaaggtatcaatttcaataaaatattgagaaaagattct
cttttgggttttataggtcctagtatttatcttcctatatttcattcaggggctatcaaa
agtacatataaaatagctggaactgatatgaacatatttatagaagaatataataaagca
gtcattaatgcatataatgatgtagacaatgaactttacaaaaccaaaactttatggagc
actttaaatagttctgaagaaaattttaaagtagaaacagatttactttctagagataaa
aaaagattccagataggaactatctctaaacatgattatctttctcaaaaatataactgg
tataacagtaaactggataatgaacaacatcattttaatttatacacccaacaattacaa
cttataaattcccttggaggagtgtataaacttgacaaataa
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