Gambusia affinis (western mosquitofish): 122831004
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Entry
122831004 CDS
T07758
Name
(RefSeq) complement C1r subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122831004
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122831004
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122831004
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
122831004
Peptidases and inhibitors [BR:
gaf01002
]
Serine peptidases
Family S1: chymotrypsin family
122831004
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Opsonins
122831004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
FXa_inhibition
EGF_CA
cEGF
CUB
Sushi
Trypsin_2
EGF_3
EGF
CUB_2
Motif
Other DBs
NCBI-GeneID:
122831004
NCBI-ProteinID:
XP_043972821
LinkDB
All DBs
Position
LG05:18667048..18681179
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AA seq
512 aa
AA seq
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MDIFNARIGWTSFIIWFLHLLVCECVPLPDSGQCPQLHPVNLQKQWEISVPDGFQINLTF
THVDNKSSITVLYDEKVLGKFCGNENSADGHHPGHQPILSPGSRLTLIFQSDDYNPDRKQ
NVGFSAQYQAIDIDECSAPEPEDGSGPLCSQICLNTLGSYRCACHHGYKLRSDQRTCMLI
DCGEPEPLLNGGVTLLSGFQNQYLSVVQYHCNEPFYSPYGGNNVSLTCEADGQWRTNHDV
ILRPACLPVCGRPTKQIENPFQRIIGGNEAAEHTIPWQALINVGDSRGGGMIIADRWILT
AAHVVVTNGQVQTPEALSIYLGVTDVHQIIETPSLNATAVHVHPEYNNPDNLNFDHDIAL
IKIKDSVTFQAAIMPLCLPSQGDTYDTGMMGLVSGFGIAGKGYRQRFLPNKLKYVHIPVV
EQERCSNSLKGIRNSRTPNLTDNMFCAGTPEGWKDSCQGDDGSGFTLQSENGRFWAAGIV
SWGVKCGQKGTYGFYTKVANYVDWINKIMQEN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcaatgccaggattggttggacatctttcatcatatggtttctgcatctg
ttggtgtgtgagtgtgtcccactgccggactcagggcagtgtcctcagctccatcccgtc
aacctgcagaagcagtgggagatcagcgtcccggacggctttcagatcaacctgaccttc
acacatgtggacaacaaatcctcaattactgtcctatatgatgaaaaagtgcttggaaag
ttttgtggcaatgagaactctgctgatggacatcaccccggccaccagcccattttgtct
ccaggcagcagactcaccctgatattccagtccgatgactacaacccggaccgaaaacag
aatgtgggattttctgctcagtaccaagcaatagacattgatgaatgctcagcaccagaa
cctgaggatggatcaggtccactctgctctcagatctgcctcaacactcttgggtcatac
cgctgtgcttgtcaccatggctacaagctacgctcagaccaacgcacctgcatgttaatt
gactgtggagaacctgagccgctgctgaatggaggagtaacattgctgtctggcttccag
aaccaatatctttctgttgttcagtatcattgcaatgaaccattttattcaccatatggt
ggcaataatgtttctctcacctgtgaagcagatggacagtggagaaccaaccatgatgtt
attttaagaccagcatgcctaccagtttgtggtcgaccaacaaaacaaattgaaaatccc
tttcagaggattattggaggaaatgaagctgcagagcataccatcccatggcaagcttta
ataaatgtaggtgacagcaggggaggaggtatgatcatagcagatcgctggatcttgact
gcagctcacgtggttgtgactaatggacaagtacaaactcctgaggctttatctatttac
cttggcgttacagatgttcaccaaattatagaaactccttccctgaatgcaactgcagtc
catgttcaccctgaatataataatccagacaatttgaactttgaccacgacattgcattg
ataaagattaaagactcggtcacattccaagcagcaataatgccactgtgtctgccatca
cagggtgacacatatgacacgggaatgatggggctggtatccggctttggcattgcaggc
aagggctatcggcagcgttttctaccaaataagctgaagtatgtacatattccagtggtg
gaacaggaaagatgtagtaattctttgaagggaatacgtaatagccggacaccaaacctg
acagacaacatgttctgtgctggaactcctgaaggctggaaggactcttgccaaggtgat
gatgggagtggcttcactctgcaatctgaaaatggacgattctgggctgctgggattgtc
agctggggggtcaaatgtggacagaaaggaacatacggattttataccaaagtggcaaat
tatgtagactggattaacaagatcatgcaggaaaattga
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