Geotalea daltonii: Geob_0315
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Entry
Geob_0315 CDS
T00846
Name
(GenBank) efflux pump, RND family, outer membrane protein
KO
K12340
outer membrane protein
Organism
geo
Geotalea daltonii
Pathway
geo01501
beta-Lactam resistance
geo01503
Cationic antimicrobial peptide (CAMP) resistance
geo02020
Two-component system
geo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Geob_0315
09132 Signal transduction
02020 Two-component system
Geob_0315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Geob_0315
01503 Cationic antimicrobial peptide (CAMP) resistance
Geob_0315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
geo02000
]
Geob_0315
02044 Secretion system [BR:
geo02044
]
Geob_0315
01504 Antimicrobial resistance genes [BR:
geo01504
]
Geob_0315
Transporters [BR:
geo02000
]
Other transporters
Pores ion channels [TC:
1
]
Geob_0315
Secretion system [BR:
geo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Geob_0315
RTX toxin transporter
Geob_0315
Multiple protein transporter
Geob_0315
RaxAB-RaxC type I secretion system protein
Geob_0315
Antimicrobial resistance genes [BR:
geo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Geob_0315
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Geob_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TcdA_TcdB_pore
Porin_OmpL1
Motif
Other DBs
NCBI-ProteinID:
ACM18686
UniProt:
B9M9C8
LinkDB
All DBs
Position
375471..377051
Genome browser
AA seq
526 aa
AA seq
DB search
MRRDWLKLPLPIIILVQLLSIDGQCESLPQELNLSRTDAIKMAITGNIEVHNESLSSFMA
ELDSIRSRSIYNPLLTLSANSGINASPGEPFRTRNTQTTIGLSQNLPTGGSISVTTQTGY
ATAESEDPELTSRNWQTSLGLNLSQPLLRNAGRETNEFSIFAADSNLQDAVERFRSIIID
TVHAVVTSYNRLYTLRRILETRKAALASAEMLLEGVRQKVTPETPLAMEVADADFAVVQR
RKELVEAERNVRDHEAGFRYLIGQEGKATIIPVDPPSREEPQETEEQAVVAALGLRPELL
QLQISYNVAQVQERIARRQAWPELSLTGSGGLNGTGETMSKNWKEIIDGRRRFWTVGMQF
SYPIGNTAAVNDYRRSKIRTEQLLNQIRSLSWRIRNEVESDMRALISARLQVRMADMSLR
IAEKRLEEYRRNNQAGTSTVQDVIDAQNDLTFARNSQVDAVETFASAVSRLWRDMGTLLD
HHGIKIDAEHVGKIAGKTALKEESKPEGLGLQLPDLEWAMEAFRAK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgagattggctgaaattgccactccccatcatcatcctggtgcaactgctaagc
attgacggtcagtgtgaaagccttccccaagaactcaacctttcccgcacggatgccata
aaaatggccataactggcaacatagaggttcataacgaatctctttcctcattcatggca
gaacttgattccatccgcagccgcagcatttacaacccgctactgacactttccgcaaac
agcggcataaatgcttcaccgggagagccttttcgaaccagaaacacccagaccaccatc
ggactttcccagaaccttcccaccggcggaagtatctccgttaccacccagaccggttac
gctaccgccgaatcggaagacccggaattgacaagcaggaactggcagacatctctgggg
cttaacctaagtcagccgctgttacgcaacgcaggcagggaaacgaacgagttttccatt
tttgctgccgacagcaatctacaggatgccgtggagaggtttcgctccatcattatcgat
accgttcacgccgtcgtcacgtcctacaaccgtctttataccctgcgtcggattctggag
acgcgcaaggctgccctagcttctgctgaaatgttgcttgaaggtgtcaggcaaaaggta
accccggaaacaccactggccatggaggtggcagatgccgattttgccgttgtccagcgt
cgcaaggagctggtggaggcggaacgcaatgtaagggaccatgaggcaggcttccgttac
cttatcggtcaggaagggaaagccaccataatccccgttgatccaccctcccgggaggag
ccgcaggagacggaggaacaggctgtagtggctgcactcggtctacgtcccgaactgctg
cagttgcaaatttcatataatgtggcgcaggtgcaggagcgcatcgcaaggcggcaggcc
tggcccgagctttccctgacgggtagcggcggacttaacggcactggtgagactatgagc
aaaaactggaaggagatcattgacggcagaagacgattttggaccgtcggcatgcagttc
agctatcccatcggcaatacggcagccgtcaatgattaccgcaggagcaagatcaggacc
gaacagttgctaaaccagatcaggtcgctcagctggaggatccgcaatgaggtagagtcg
gacatgcgggcgttgatttctgcccgattgcaggtgcggatggccgacatgtccttgagg
atagcggagaagcgtcttgaagaataccgcaggaacaatcaggccggtacaagcacagtt
caggatgtgatcgatgcgcaaaacgatctgacctttgccagaaattcacaggtggatgcg
gtagaaacctttgccagcgcggtgtcaaggctctggagggacatgggcacgcttttagac
caccacggcattaaaatagatgctgagcatgtggggaaaatagctggaaagacagccctg
aaagaggaatcgaagccggaggggctgggcctgcaactacccgacctggaatgggccatg
gaagccttcagggccaaataa
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