KEGG   Geothrix sp. PMB-07: Q9293_04170
Entry
Q9293_04170       CDS       T09655                                 
Name
(GenBank) TolC family protein
  KO
K12340  outer membrane protein
Organism
gep  Geothrix sp. PMB-07
Pathway
gep01501  beta-Lactam resistance
gep01503  Cationic antimicrobial peptide (CAMP) resistance
gep02020  Two-component system
gep03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gep00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Q9293_04170
  09132 Signal transduction
   02020 Two-component system
    Q9293_04170
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Q9293_04170
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Q9293_04170
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gep02000]
    Q9293_04170
   02044 Secretion system [BR:gep02044]
    Q9293_04170
   01504 Antimicrobial resistance genes [BR:gep01504]
    Q9293_04170
Transporters [BR:gep02000]
 Other transporters
  Pores ion channels [TC:1]
   Q9293_04170
Secretion system [BR:gep02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   Q9293_04170
  RTX toxin transporter
   Q9293_04170
  Multiple protein transporter
   Q9293_04170
  RaxAB-RaxC type I secretion system protein
   Q9293_04170
Antimicrobial resistance genes [BR:gep01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    Q9293_04170
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    Q9293_04170
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: WLT32529
LinkDB
Position
961994..963268
AA seq 424 aa
MLLGVGLLAQEPLTVAEAIRRAWTDQAGLRAGQALVEAREVDAEALRDLRLPSLTLSANG
VRTNEPMQAFGIKLNQARIASSDFNPTSLNHPDPISAFGGSFVVQQPLYAGGRISSARRA
GAFMAQAEQASQERRKQETAQQVVEAYFGAQAAEQALLWAEETLAWVRGMEAFVDARVAQ
GLMLEAEAQRLKAAHAQVEAQRVEAQARVRNARSGLGLLTGKGPFQGGFATPLDLVLPEA
VMGSNRADLVAASFQAQAAQEQAKAASGSLLPEVGLELGVGTLHQSWSDKGNWSWAAVGV
KWRVFSAPDRSKAHAARAQARAAEETRTFKQQQAEHETRVARENMSAAEARVVAARQALA
AAEESKRLREARHREGLTPLTEVLDAEAVRQGARALLLQSLYDLRTSRAALDLATGAPIE
GVTP
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgttgctcggtgttggccttctggctcaggagccgctgacggtggccgaggccatccgc
cgcgcatggacggaccaggcgggcctccgggccggtcaggccctggtggaggcccgcgag
gtcgatgcggaggccctccgcgacctccgcttgcccagcctcaccctgagcgccaacggg
gtgcgcaccaacgagcccatgcaggccttcggcatcaagctgaaccaggctcgcatcgcc
tcctcggatttcaatcccacctccctgaaccatcccgatcccatcagcgcctttggcggc
tctttcgtggtgcagcagcccctttacgcgggtggccgcatcagctcggcccgcagggct
ggcgccttcatggcgcaagctgagcaggccagccaggaacgccggaagcaggagactgcc
cagcaggtggtggaggcttatttcggcgctcaggcggcggagcaggctttgctctgggcg
gaggaaaccctcgcctgggtgcggggcatggaggcctttgtcgatgcccgcgtggcccag
ggcctgatgctggaagcggaagcccagcgcctgaaggccgcccatgcccaggtggaggcc
cagcgggtcgaggctcaggcccgggtgcgcaacgcccgctccggcttgggcctgctgacg
gggaaggggccctttcaaggcggcttcgccacgccactggatttggtgcttcccgaagcg
gtgatgggttcgaatcgcgcggatcttgtggccgcgagcttccaggcccaagccgcccag
gagcaggccaaggccgcctcggggagtctgctgcccgaggtggggcttgagctgggcgtc
ggcacgctgcaccagtcctggtccgataagggcaactggagctgggcggcggtgggcgtg
aagtggcgggtcttttcggcaccggaccgctccaaggcccatgcggcccgcgcccaggct
cgggcggcggaagagaccaggaccttcaaacagcagcaagccgagcacgaaacccgtgtg
gcccgcgaaaacatgtcggctgccgaagcccgagtggtggcggcccgccaagccctggcc
gcggcagaagaatcgaagcggctccgcgaggcccggcaccgggaagggctgacgcccctg
acggaagtgctggacgccgaagccgtccgccaaggcgcccgcgccctcctgctgcaaagc
ctctatgacctgcgaaccagccgggcggccctggatctggccaccggcgcccccatcgaa
ggagtgacaccatga

DBGET integrated database retrieval system