Geothrix sp. PMB-07: Q9293_04170
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Entry
Q9293_04170 CDS
T09655
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
gep
Geothrix sp. PMB-07
Pathway
gep01501
beta-Lactam resistance
gep01503
Cationic antimicrobial peptide (CAMP) resistance
gep02020
Two-component system
gep03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Q9293_04170
09132 Signal transduction
02020 Two-component system
Q9293_04170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q9293_04170
01503 Cationic antimicrobial peptide (CAMP) resistance
Q9293_04170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gep02000
]
Q9293_04170
02044 Secretion system [BR:
gep02044
]
Q9293_04170
01504 Antimicrobial resistance genes [BR:
gep01504
]
Q9293_04170
Transporters [BR:
gep02000
]
Other transporters
Pores ion channels [TC:
1
]
Q9293_04170
Secretion system [BR:
gep02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Q9293_04170
RTX toxin transporter
Q9293_04170
Multiple protein transporter
Q9293_04170
RaxAB-RaxC type I secretion system protein
Q9293_04170
Antimicrobial resistance genes [BR:
gep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Q9293_04170
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Q9293_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WLT32529
LinkDB
All DBs
Position
961994..963268
Genome browser
AA seq
424 aa
AA seq
DB search
MLLGVGLLAQEPLTVAEAIRRAWTDQAGLRAGQALVEAREVDAEALRDLRLPSLTLSANG
VRTNEPMQAFGIKLNQARIASSDFNPTSLNHPDPISAFGGSFVVQQPLYAGGRISSARRA
GAFMAQAEQASQERRKQETAQQVVEAYFGAQAAEQALLWAEETLAWVRGMEAFVDARVAQ
GLMLEAEAQRLKAAHAQVEAQRVEAQARVRNARSGLGLLTGKGPFQGGFATPLDLVLPEA
VMGSNRADLVAASFQAQAAQEQAKAASGSLLPEVGLELGVGTLHQSWSDKGNWSWAAVGV
KWRVFSAPDRSKAHAARAQARAAEETRTFKQQQAEHETRVARENMSAAEARVVAARQALA
AAEESKRLREARHREGLTPLTEVLDAEAVRQGARALLLQSLYDLRTSRAALDLATGAPIE
GVTP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcggtgttggccttctggctcaggagccgctgacggtggccgaggccatccgc
cgcgcatggacggaccaggcgggcctccgggccggtcaggccctggtggaggcccgcgag
gtcgatgcggaggccctccgcgacctccgcttgcccagcctcaccctgagcgccaacggg
gtgcgcaccaacgagcccatgcaggccttcggcatcaagctgaaccaggctcgcatcgcc
tcctcggatttcaatcccacctccctgaaccatcccgatcccatcagcgcctttggcggc
tctttcgtggtgcagcagcccctttacgcgggtggccgcatcagctcggcccgcagggct
ggcgccttcatggcgcaagctgagcaggccagccaggaacgccggaagcaggagactgcc
cagcaggtggtggaggcttatttcggcgctcaggcggcggagcaggctttgctctgggcg
gaggaaaccctcgcctgggtgcggggcatggaggcctttgtcgatgcccgcgtggcccag
ggcctgatgctggaagcggaagcccagcgcctgaaggccgcccatgcccaggtggaggcc
cagcgggtcgaggctcaggcccgggtgcgcaacgcccgctccggcttgggcctgctgacg
gggaaggggccctttcaaggcggcttcgccacgccactggatttggtgcttcccgaagcg
gtgatgggttcgaatcgcgcggatcttgtggccgcgagcttccaggcccaagccgcccag
gagcaggccaaggccgcctcggggagtctgctgcccgaggtggggcttgagctgggcgtc
ggcacgctgcaccagtcctggtccgataagggcaactggagctgggcggcggtgggcgtg
aagtggcgggtcttttcggcaccggaccgctccaaggcccatgcggcccgcgcccaggct
cgggcggcggaagagaccaggaccttcaaacagcagcaagccgagcacgaaacccgtgtg
gcccgcgaaaacatgtcggctgccgaagcccgagtggtggcggcccgccaagccctggcc
gcggcagaagaatcgaagcggctccgcgaggcccggcaccgggaagggctgacgcccctg
acggaagtgctggacgccgaagccgtccgccaaggcgcccgcgccctcctgctgcaaagc
ctctatgacctgcgaaccagccgggcggccctggatctggccaccggcgcccccatcgaa
ggagtgacaccatga
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