Geothrix oryzae: GETHOR_06960
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Entry
GETHOR_06960 CDS
T09137
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
gex
Geothrix oryzae
Pathway
gex01501
beta-Lactam resistance
gex01503
Cationic antimicrobial peptide (CAMP) resistance
gex02020
Two-component system
gex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GETHOR_06960
09132 Signal transduction
02020 Two-component system
GETHOR_06960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GETHOR_06960
01503 Cationic antimicrobial peptide (CAMP) resistance
GETHOR_06960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gex02000
]
GETHOR_06960
02044 Secretion system [BR:
gex02044
]
GETHOR_06960
01504 Antimicrobial resistance genes [BR:
gex01504
]
GETHOR_06960
Transporters [BR:
gex02000
]
Other transporters
Pores ion channels [TC:
1
]
GETHOR_06960
Secretion system [BR:
gex02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GETHOR_06960
RTX toxin transporter
GETHOR_06960
Multiple protein transporter
GETHOR_06960
RaxAB-RaxC type I secretion system protein
GETHOR_06960
Antimicrobial resistance genes [BR:
gex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GETHOR_06960
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GETHOR_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BDU68595
UniProt:
A0ABN6UVN8
LinkDB
All DBs
Position
787863..789182
Genome browser
AA seq
439 aa
AA seq
DB search
MIICKMRTLALLLTVGGGLLAQDGLTVAEAIRRAWKDQAGLKSGRALAESRREEASGQRD
LRLPTLTLNAQGVRTDEPMMAFGMKLNQSRITAMDFNPSSLNRPDPIAGFGGSAVLRQPL
YTGGRLGAARAAGDFSAQGEAASQARREQEAALAVVEAYFGAQVAEQALVWVADTRTWVQ
GLQAFVGARVAQGLMLEAELQRLKAFGAQVEAQGAETTRQLRTARSGLGLLTGTGPVEGP
LATPLSEAPAGPSAASTSGSRGDLQAAEFQAKAAAQAARAAKGSLLPEVGLELGAGTLRQ
SWSQGGTWTWAALGVSWKVFSAPDQSKARAARAQARSAEEMWTFKRQQAQHEVRAAREAV
VAAEARHAAARESLAAATESRRLREARHREGLTPLTDVLDAEAAVQGARTLLLQSLYDLR
VSRAALDLATGAPIEGVTP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattatttgtaaaatgcgaacgctggccctgcttctgaccgttggcggaggcctcctg
gcccaggacgggctcacggttgccgaggccatccgaagggcctggaaggatcaggccggc
ctgaaatcgggccgggcgctggccgaaagccgccgggaggaggcctccggccagcgggac
ctgcgcctgcccaccctcaccctgaacgcccagggtgtgcgcacggacgagccgatgatg
gccttcggcatgaagctgaaccagagccgcatcacggccatggacttcaacccgtccagc
ctgaaccggcccgatcccatcgcgggcttcgggggctccgcggtcctccgccagcccctg
tacacgggtggtcgcctcggcgcggctcgggcggcgggcgatttttcggcccagggagag
gccgccagccaggcccgacgggagcaggaggcggccctggcggtggtggaggcctatttc
ggggcccaggtggccgagcaggcgctggtctgggtggcggatacccgcacctgggtgcag
ggactccaggcctttgtgggggcccgcgtcgcccagggcctgatgctcgaagctgaactg
cagcggctcaaggccttcggcgcgcaggtggaggcccagggggccgagaccacccgccag
ctgcgcacggcgcggtccgggctgggcctgctgacgggcaccggccccgtggaagggccg
ctcgccacgccgctttccgaggccccggcgggtccgtccgctgcctcgacgagcggctcc
cggggagatctccaggccgccgaattccaggcgaaggccgcggcccaggcggcgcgggcc
gccaagggcagcctcctgcccgaagtggggctggagctgggcgccgggacgctgaggcag
tcctggagccagggcggcacctggacctgggccgccctcggcgtgagctggaaggtgttc
tcggccccggaccagtcgaaggcgcgggccgcccgcgcccaggcccgatccgcggaagag
atgtggacattcaagcggcagcaggcgcagcacgaagtccgggcggcccgcgaggccgtg
gtggccgccgaagcccgccacgccgccgcccgggagtccctggccgcggccacggaatcc
cgtcggctgcgggaggcccggcaccgggaggggctcacccccctcacggatgtgctggat
gcggaggccgccgtgcagggagcccgcaccctcctgctccagagcctctacgacctgcgc
gtcagccgcgcggccctcgacctggccaccggcgcccccatcgaaggagtgaccccatga
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